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Ian Fiddes
Ian Fiddes
10x Genomics
Verified email at 10xgenomics.com
Title
Cited by
Cited by
Year
The complete sequence of a human genome
S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ...
Science 376 (6588), 44-53, 2022
35712022
GENCODE reference annotation for the human and mouse genomes
A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ...
Nucleic acids research 47 (D1), D766-D773, 2019
33902019
Nanopore sequencing and assembly of a human genome with ultra-long reads
M Jain, S Koren, KH Miga, J Quick, AC Rand, TA Sasani, JR Tyson, ...
Nature biotechnology 36 (4), 338-345, 2018
23192018
GENCODE 2021
A Frankish, M Diekhans, I Jungreis, J Lagarde, JE Loveland, JM Mudge, ...
Nucleic acids research 49 (D1), D916-D923, 2021
13742021
Improved data analysis for the MinION nanopore sequencer
M Jain, IT Fiddes, KH Miga, HE Olsen, B Paten, M Akeson
Nature methods 12 (4), 351-356, 2015
8662015
Comprehensive molecular characterization of pheochromocytoma and paraganglioma
L Fishbein, I Leshchiner, V Walter, L Danilova, AG Robertson, ...
Cancer cell 31 (2), 181-193, 2017
8232017
Establishing cerebral organoids as models of human-specific brain evolution
AA Pollen, A Bhaduri, MG Andrews, TJ Nowakowski, OS Meyerson, ...
Cell 176 (4), 743-756. e17, 2019
6292019
Human-specific NOTCH2NL genes affect notch signaling and cortical neurogenesis
IT Fiddes, GA Lodewijk, M Mooring, CM Bosworth, AD Ewing, ...
Cell 173 (6), 1356-1369. e22, 2018
6292018
Progressive Cactus is a multiple-genome aligner for the thousand-genome era
J Armstrong, G Hickey, M Diekhans, IT Fiddes, AM Novak, A Deran, ...
Nature 587 (7833), 246-251, 2020
5622020
The UCSC genome browser database: 2018 update
J Casper, AS Zweig, C Villarreal, C Tyner, ML Speir, KR Rosenbloom, ...
Nucleic acids research 46 (D1), D762-D769, 2018
5452018
Combinatorial single-cell CRISPR screens by direct guide RNA capture and targeted sequencing
JM Replogle, TM Norman, A Xu, JA Hussmann, J Chen, JZ Cogan, ...
Nature biotechnology 38 (8), 954-961, 2020
4822020
High-resolution comparative analysis of great ape genomes
ZN Kronenberg, IT Fiddes, D Gordon, S Murali, S Cantsilieris, ...
Science 360 (6393), eaar6343, 2018
4352018
A robust benchmark for detection of germline large deletions and insertions
JM Zook, NF Hansen, ND Olson, L Chapman, JC Mullikin, C Xiao, ...
Nature biotechnology 38 (11), 1347-1355, 2020
4212020
A comparative genomics multitool for scientific discovery and conservation
Nature 587 (7833), 240-245, 2020
3892020
Long-read sequence assembly of the gorilla genome
D Gordon, J Huddleston, MJP Chaisson, CM Hill, ZN Kronenberg, ...
Science 352 (6281), aae0344, 2016
3612016
Improved reference genome for the domestic horse increases assembly contiguity and composition
TS Kalbfleisch, ES Rice, MS DePriest Jr, BP Walenz, MS Hestand, ...
Communications biology 1 (1), 197, 2018
2962018
Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci
J Lilue, AG Doran, IT Fiddes, M Abrudan, J Armstrong, R Bennett, ...
Nature genetics 50 (11), 1574-1583, 2018
2712018
Resolving the full spectrum of human genome variation using Linked-Reads
P Marks, S Garcia, AM Barrio, K Belhocine, J Bernate, R Bharadwaj, ...
Genome research 29 (4), 635-645, 2019
2612019
A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing
AA Petti, SR Williams, CA Miller, IT Fiddes, SN Srivatsan, DY Chen, ...
Nature communications 10 (1), 3660, 2019
2532019
Benchmarking challenging small variants with linked and long reads
J Wagner, ND Olson, L Harris, Z Khan, J Farek, M Mahmoud, A Stankovic, ...
Cell genomics 2 (5), 2022
2002022
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Articles 1–20