| MicroRNAs: new candidates for the regulation of the human cumulus–oocyte complex S Assou, T Al-Edani, D Haouzi, N Philippe, CH Lecellier, D Piquemal, ... Human reproduction 28 (11), 3038-3049, 2013 | 153 | 2013 |
| Long non-coding RNAs in human early embryonic development and their potential in ART J Bouckenheimer, S Assou, S Riquier, C Hou, N Philippe, C Sansac, ... Human reproduction update 23 (1), 19-40, 2017 | 135 | 2017 |
| CRAC: an integrated approach to the analysis of RNA-seq reads N Philippe, M Salson, T Commes, E Rivals Genome biology 14 (3), 1-16, 2013 | 91 | 2013 |
| DE-kupl: exhaustive capture of biological variation in RNA-seq data through k-mer decomposition J Audoux, N Philippe, R Chikhi, M Salson, M Gallopin, M Gabriel, ... Genome biology 18 (1), 243, 2017 | 62 | 2017 |
| Using reads to annotate the genome: influence of length, background distribution, and sequence errors on prediction capacity N Philippe, A Boureux, L Bréhélin, J Tarhio, T Commes, É Rivals Nucleic acids research 37 (15), e104-e104, 2009 | 30 | 2009 |
| Combining DGE and RNA-sequencing data to identify new polyA+ non-coding transcripts in the human genome N Philippe, E Bou Samra, A Boureux, A Mancheron, F Ruffle, Q Bai, ... Nucleic Acids Research 42 (5), 2820-2832, 2014 | 23 | 2014 |
| Querying large read collections in main memory: a versatile data structure N Philippe, M Salson, T Lecroq, M Léonard, T Commes, E Rivals BMC bioinformatics 12 (1), 242, 2011 | 21 | 2011 |
| SimBA: A methodology and tools for evaluating the performance of RNA-Seq bioinformatic pipelines J Audoux, M Salson, CF Grosset, S Beaumeunier, JM Holder, T Commes, ... BMC bioinformatics 18 (1), 428, 2017 | 15 | 2017 |
| Genome Alert!: A standardized procedure for genomic variant reinterpretation and automated gene–phenotype reassessment in clinical routine K Yauy, F Lecoquierre, S Baert-Desurmont, D Trost, A Boughalem, ... Genetics in Medicine 24 (6), 1316-1327, 2022 | 14 | 2022 |
| Predominance of BRCA2 Mutation and Estrogen Receptor Positivity in Unselected Breast Cancer with BRCA1 or BRCA2 Mutation P Pujol, K Yauy, A Coffy, N Duforet-Frebourg, S Gabteni, JP Daurès, ... Cancers 14 (13), 3266, 2022 | 13 | 2022 |
| New chimeric RNAs in acute myeloid leukemia F Ruffle, J Audoux, A Boureux, S Beaumeunier, JB Gaillard, EB Samra, ... F1000Research 6, ISCB Comm J-1302, 2017 | 11 | 2017 |
| System for analysing genomic data comprising a plurality of application nodes and a knowledge database N Philippe, G BUWALDA US Patent 11,424,009, 2022 | 9 | 2022 |
| Genomic analysis of adult thrombotic microangiopathies in less than 3 days: from rapid to fast genomics to treatment N Yousfi, C Mousseaux, A Hamza, P Laville, M Mille, N Philippe, ... Blood 144 (21), 2266-2269, 2024 | 8 | 2024 |
| Clinical evaluation of a low-coverage whole-genome test for detecting homologous recombination deficiency in ovarian cancer R Boidot, MGB Blum, MP Wissler, C Gottin, J Ruzicka, S Chevrier, ... European Journal of Cancer 202, 113978, 2024 | 7 | 2024 |
| 39MO Clinical evaluation of a low-coverage whole-genome test for homologous recombination deficiency detection in ovarian cancer R Boidot, MGB Blum, MP Wissler, C Gottin, J Ruzicka, N Duforet-Frebourg, ... ESMO Open 8 (1), 2023 | 7 | 2023 |
| Learning phenotypic patterns in genetic diseases by symptom interaction modeling K Yauy, N Duforet-Frebourg, Q Testard, S Beaumeunier, J Audoux, ... medRxiv, 2022.07. 29.22278181, 2022 | 4 | 2022 |
| On the evaluation of the fidelity of supervised classifiers in the prediction of chimeric RNAs S Beaumeunier, J Audoux, A Boureux, F Ruffle, T Commes, N Philippe, ... BioData Mining 9 (1), 34, 2016 | 4 | 2016 |
| The Role of Machine Learning in Finding Chimeric RNAs S Beaumeunier, J Audoux, A Boureux, T Commes, N Philippe, R Alves 2015 26th International Workshop on Database and Expert Systems Applications …, 2015 | 4 | 2015 |
| Clinical Evaluation of an AI System for Streamlined Variant Interpretation in Genetic Testing J Ruzicka, JM Ravel, J Audoux, A Boulat, J Thévenon, K Yauy, M Dancer, ... medRxiv, 2025.02. 04.25321641, 2025 | 2 | 2025 |
| A scalable indexing solution to mine huge genomic sequence collections E Rivals, N Philippe, M Salson, M Léonard, T Commes, T Lecroq ERCIM News 2012 (89), 20-21, 2012 | 2 | 2012 |
Eric RivalsLIRMM, Centre National Recherche Scientifique (CNRS) & Univ. Montpellier, FranceVerified email at lirmm.fr
