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Hanxue Gu
Hanxue Gu
Verified email at ucsf.edu - Homepage
Title
Cited by
Cited by
Year
Segment anything model for medical image analysis: an experimental study
MA Mazurowski, H Dong, H Gu, J Yang, N Konz, Y Zhang
Medical Image Analysis 89, 102918, 2023
8452023
How to build the best medical image segmentation algorithm using foundation models: a comprehensive empirical study with segment anything model
H Gu, H Dong, J Yang, MA Mazurowski
Journal of Machine Learning for Biomedical Imaging (MELBA):2025:006 3 (May …, 2025
492025
Touchstone benchmark: Are we on the right way for evaluating ai algorithms for medical segmentation?
PRAS Bassi, W Li, Y Tang, F Isensee, Z Wang, J Chen, YC Chou, ...
Advances in Neural Information Processing Systems 37, 15184-15201, 2024
452024
SegmentAnyBone: A universal model that segments any bone at any location on MRI
H Gu, R Colglazier, H Dong, J Zhang, Y Chen, Z Yildiz, Y Chen, L Li, ...
Medical Image Analysis 101, 103469, 2025
332025
Segment anything model 2: an application to 2d and 3d medical images
H Dong, H Gu, Y Chen, J Yang, Y Chen, MA Mazurowski
arXiv preprint arXiv:2408.00756, 2024
332024
A publicly available deep learning model and dataset for segmentation of breast, fibroglandular tissue, and vessels in breast mri
CO Lew, M Harouni, ER Kirksey, EJ Kang, H Dong, H Gu, LJ Grimm, ...
Scientific reports 14 (1), 5383, 2024
312024
FDU-net: deep learning-based three-dimensional diffuse optical image reconstruction
B Deng, H Gu, H Zhu, K Chang, KV Hoebel, JB Patel, J Kalpathy-Cramer, ...
IEEE transactions on medical imaging 42 (8), 2439-2450, 2023
272023
A competition, benchmark, code, and data for using artificial intelligence to detect lesions in digital breast tomosynthesis
N Konz, M Buda, H Gu, A Saha, J Yang, J Chłędowski, J Park, J Witowski, ...
JAMA network open 6 (2), e230524-e230524, 2023
242023
The intrinsic manifolds of radiological images and their role in deep learning
N Konz, H Gu, H Dong, MA Mazurowski
International Conference on Medical Image Computing and Computer-Assisted …, 2022
202022
ContourDiff: Unpaired Medical Image Translation with Structural Consistency
Y Chen, N Konz, H Gu, H Dong, Y Chen, L Li, J Lee, MA Mazurowski
Machine Learning for Biomedical Imaging 3 (November 2025 issue), 711-727, 2025
19*2025
SWSSL: sliding window-based self-supervised learning for anomaly detection in high-resolution images
H Dong, Y Zhang, H Gu, N Konz, Y Zhang, MA Mazurowski
IEEE transactions on medical imaging 42 (12), 3860-3870, 2023
142023
Medical image segmentation with intent: Integrated entropy weighting for single image test-time adaptation
H Dong, N Konz, H Gu, MA Mazurowski
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2024
132024
How to Efficiently Annotate Images for Best-Performing Deep Learning Based Segmentation Models: An Empirical Study with Weak and Noisy Annotations and Segment Anything Model
Y Zhang, S Zhao, H Gu, MA Mazurowski
Journal of Imaging Informatics in Medicine, 2025
102025
Deep learning enabled high-speed image reconstruction for breast diffuse optical tomography
B Deng, H Gu, SA Carp
Optical Tomography and Spectroscopy of Tissue XIV 11639, 116390B, 2021
102021
MRI-CORE: A Foundation Model for Magnetic Resonance Imaging
H Dong, Y Chen, H Gu, N Konz, Y Chen, Q Li, MA Mazurowski
arXiv preprint arXiv:2506.12186, 2025
92025
Knee arthritis severity measurement using deep learning: a publicly available algorithm with a multi-institutional validation showing radiologist-level performance
H Gu, K Li, RJ Colglazier, J Yang, M Lebhar, J O'Donnell, WA Jiranek, ...
arXiv preprint arXiv:2203.08914, 2022
9*2022
A systematic study of the foreground-background imbalance problem in deep learning for object detection
H Gu, H Dong, N Konz, MA Mazurowski
arXiv preprint arXiv:2306.16539, 2023
82023
Deep learning automates Cobb angle measurement compared with multi-expert observers
K Li, H Gu, R Colglazier, R Lark, E Hubbard, R French, D Smith, J Zhang, ...
BJR| Artificial Intelligence 2 (1), ubaf009, 2025
72025
Lightweight transformer backbone for medical object detection
Y Zhang, H Dong, N Konz, H Gu, MA Mazurowski
MICCAI Workshop on Cancer Prevention through Early Detection, 47-56, 2022
72022
Segmentwithsam: 3d slicer extension for segment anything model (sam)
Z Yildiz, H Gu, J Zhang, J Yang, MA Mazurowski
Medical Imaging with Deep Learning, 2024
62024
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