| Phylogenomics and the evolution of hemipteroid insects KP Johnson, CH Dietrich, F Friedrich, RG Beutel, B Wipfler, RS Peters, ... Proceedings of the National Academy of Sciences 115 (50), 12775-12780, 2018 | 415 | 2018 |
| Rancho La Brea stable isotope biogeochemistry and its implications for the palaeoecology of late Pleistocene, coastal southern California JB Coltrain, JM Harris, TE Cerling, JR Ehleringer, MD Dearing, J Ward, ... Palaeogeography, Palaeoclimatology, Palaeoecology 205 (3-4), 199-219, 2004 | 262 | 2004 |
| Pair of lice lost or parasites regained: the evolutionary history of anthropoid primate lice DL Reed, JE Light, JM Allen, JJ Kirchman Bmc Biology 5 (1), 7, 2007 | 228 | 2007 |
| Natural history collections as emerging resources for innovative education JA Cook, SV Edwards, EA Lacey, RP Guralnick, PS Soltis, DE Soltis, ... BioScience 64 (8), 725-734, 2014 | 165 | 2014 |
| Evolutionary history of mammalian sucking lice (Phthiraptera: Anoplura) JE Light, VS Smith, JM Allen, LA Durden, DL Reed BMC evolutionary biology 10 (1), 292, 2010 | 158 | 2010 |
| Rates of niche and phenotype evolution lag behind diversification in a temperate radiation RA Folk, RL Stubbs, ME Mort, N Cellinese, JM Allen, PS Soltis, DE Soltis, ... Proceedings of the National Academy of Sciences 116 (22), 10874-10882, 2019 | 151 | 2019 |
| Anchored hybrid enrichment-based phylogenomics of leafhoppers and treehoppers (Hemiptera: Cicadomorpha: Membracoidea) CH Dietrich, JM Allen, AR Lemmon, EM Lemmon, DM Takiya, ... Insect Systematics and Diversity 1 (1), 57-72, 2017 | 151 | 2017 |
| Evolutionary Relationships of “Candidatus Riesia spp.,” Endosymbiotic Enterobacteriaceae Living within Hematophagous Primate Lice JM Allen, DL Reed, MA Perotti, HR Braig Applied and Environmental Microbiology 73 (5), 1659-1664, 2007 | 133 | 2007 |
| For common community phylogenetic analyses, go ahead and use synthesis phylogenies D Li, L Trotta, HE Marx, JM Allen, M Sun, DE Soltis, PS Soltis, ... Ecology 100 (9), e02788, 2019 | 124 | 2019 |
| aTRAM 2.0: an improved, flexible locus assembler for NGS data JM Allen, R LaFrance, RA Folk, KP Johnson, RP Guralnick Evolutionary Bioinformatics 14, 1176934318774546, 2018 | 113 | 2018 |
| Host‐symbiont interactions of the primary endosymbiont of human head and body lice MA Perotti, JM Allen, DL Reed, HR Braig The FASEB Journal 21 (4), 1058-1066, 2007 | 109 | 2007 |
| Unlocking the black box of feather louse diversity: A molecular phylogeny of the hyper-diverse genus Brueelia SE Bush, JD Weckstein, DR Gustafsson, J Allen, E DiBlasi, SM Shreve, ... Molecular Phylogenetics and Evolution 94, 737-751, 2016 | 107 | 2016 |
| Phylogenomics from whole genome sequences using aTRAM JM Allen, B Boyd, NP Nguyen, P Vachaspati, T Warnow, DI Huang, ... Systematic Biology 66 (5), 786-798, 2017 | 94 | 2017 |
| Geographic Distributions and Origins of Human Head Lice (Pediculus humanus capitis) Based on Mitochondrial Data JE Light, JM Allen, LM Long, TE Carter, L Barrow, G Suren, D Raoult, ... Journal of Parasitology 94 (6), 1275-1281, 2008 | 91 | 2008 |
| aTRAM-automated target restricted assembly method: a fast method for assembling loci across divergent taxa from next-generation sequencing data JM Allen, DI Huang, QC Cronk, KP Johnson BMC bioinformatics 16 (1), 98, 2015 | 85 | 2015 |
| Two bacterial genera, Sodalis and Rickettsia, associated with the seal louse Proechinophthirus fluctus (Phthiraptera: Anoplura) BM Boyd, JM Allen, R Koga, T Fukatsu, AD Sweet, KP Johnson, DL Reed Applied and Environmental Microbiology 82 (11), 3185-3197, 2016 | 80 | 2016 |
| Mutational meltdown in primary endosymbionts: selection limits Muller's ratchet JM Allen, JE Light, MA Perotti, HR Braig, DL Reed PLoS One 4 (3), e4969, 2009 | 70 | 2009 |
| Spatial phylogenetics of the North American flora BD Mishler, R Guralnick, PS Soltis, SA Smith, DE Soltis, N Barve, JM Allen, ... Journal of Systematics and Evolution 58 (4), 393-405, 2020 | 68 | 2020 |
| Primates, lice and bacteria: speciation and genome evolution in the symbionts of hominid lice BM Boyd, JM Allen, NP Nguyen, P Vachaspati, ZS Quicksall, T Warnow, ... Molecular Biology and Evolution 34 (7), 1743-1757, 2017 | 68 | 2017 |
| Simultaneous radiation of bird and mammal lice following the K-Pg boundary KP Johnson, N Nguyen, AD Sweet, BM Boyd, T Warnow, JM Allen Biology letters 14 (5), 20180141, 2018 | 55 | 2018 |
