| Web‐based analysis and publication of flow cytometry experiments N Kotecha, PO Krutzik, JM Irish Current protocols in cytometry 53 (1), 10.17. 1-10.17. 24, 2010 | 605 | 2010 |
| Mapping normal and cancer cell signalling networks: towards single-cell proteomics JM Irish, N Kotecha, GP Nolan Nature Reviews Cancer 6 (2), 146-155, 2006 | 403 | 2006 |
| Single-cell profiling identifies aberrant STAT5 activation in myeloid malignancies with specific clinical and biologic correlates N Kotecha, NJ Flores, JM Irish, EF Simonds, DS Sakai, S Archambeault, ... Cancer cell 14 (4), 335-343, 2008 | 296 | 2008 |
| FlowRepository: A resource of annotated flow cytometry datasets associated with peer‐reviewed publications J Spidlen, K Breuer, C Rosenberg, N Kotecha, RR Brinkman Cytometry Part A 81 (9), 727-731, 2012 | 220 | 2012 |
| K-RasG12D expression induces hyperproliferation and aberrant signaling in primary hematopoietic stem/progenitor cells MEM Van Meter, E Díaz-Flores, JA Archard, E Passegué, JM Irish, ... Blood 109 (9), 3945-3952, 2007 | 142 | 2007 |
| Cytobank: providing an analytics platform for community cytometry data analysis and collaboration TJ Chen, N Kotecha High-dimensional single cell analysis: Mass cytometry, multi-parametric flow …, 2014 | 137 | 2014 |
| Expression of PD-1 by T cells in malignant glioma patients reflects exhaustion and activation TB Davidson, A Lee, M Hsu, S Sedighim, J Orpilla, J Treger, M Mastall, ... Clinical Cancer Research 25 (6), 1913-1922, 2019 | 95 | 2019 |
| DEPLOYR: a technical framework for deploying custom real-time machine learning models into the electronic medical record CK Corbin, R Maclay, A Acharya, S Mony, S Punnathanam, R Thapa, ... Journal of the American Medical Informatics Association 30 (9), 1532-1542, 2023 | 78 | 2023 |
| Evaluation of GPT-3.5 and GPT-4 for supporting real-world information needs in healthcare delivery D Dash, R Thapa, JM Banda, A Swaminathan, M Cheatham, M Kashyap, ... arXiv preprint arXiv:2304.13714, 2023 | 77 | 2023 |
| Standing on FURM ground: a framework for evaluating fair, useful, and reliable AI models in health care systems A Callahan, D McElfresh, JM Banda, G Bunney, D Char, J Chen, ... NEJM Catalyst Innovations in Care Delivery 5 (10), CAT. 24.0131, 2024 | 45 | 2024 |
| MedHELM: Holistic Evaluation of Large Language Models for Medical Tasks S Bedi, H Cui, M Fuentes, A Unell, M Wornow, JM Banda, N Kotecha, ... arXiv preprint arXiv:2505.23802, 2025 | 40 | 2025 |
| WebFlow: a software package for high-throughput analysis of flow cytometry data MM Hammer, N Kotecha, JM Irish, GP Nolan, PO Krutzik ASSAY and Drug Development Technologies 7 (1), 44-55, 2009 | 20 | 2009 |
| Pathway knowledge base: integrating BioPAX compliant data sources N Kotecha, K Bruck, W Lu, N Shah HCLS Workshop, ISWC, 2006 | 8 | 2006 |
| NetworkPainter: dynamic intracellular pathway animation in Cytobank JR Karr, H Guturu, EY Chen, SL Blair, JM Irish, N Kotecha, MW Covert BMC bioinformatics 16 (1), 172, 2015 | 6 | 2015 |
| others. 2025. Medhelm: Holistic evaluation of large language models for medical tasks S Bedi, H Cui, M Fuentes, A Unell, M Wornow, JM Banda, N Kotecha, ... arXiv preprint arXiv:2505.23802, 1 | 5 | 1 |
| Evaluation of GPT-3.5 and GPT-4 for supporting real-world information needs in healthcare delivery; 2023 D Dash, R Thapa, JM Banda, A Swaminathan, M Cheatham, M Kashyap, ... arXiv preprint arXiv:2304.13714, 0 | 5 | |
| Pathway knowledge base: An integrated pathway resource using BioPAX N Kotecha, K Bruck, W Lu, N Shah Applied Ontology 3 (4), 235-245, 2008 | 3 | 2008 |
| Feasibility of Automated Precharting using GPT-4 in New Specialty Referrals AS Liang, JM Banda, T Savage, A Pandya, R Carey, UC Megwalu, ... AMIA Summits on Translational Science Proceedings 2025, 312, 2025 | 2 | 2025 |
| A Novel Assay for Juvenile Myelomonocytic Leukemia Based on Aberrant Signaling Networks Measured Via Phospho-Specific Flow Cytometry Reduces Diagnosis Time from Weeks to Days. N Kotecha, NJ Flores, JM Irish, D Sakaguchi, S Archambeault, ... Blood 110 (11), 546, 2007 | 2 | 2007 |
| Pathway Knowledge Base: Integrating BioPAX compliant pathway knowledgebases N Kotecha, K Bruck, W Lu, N Shah Proceedings of the Workshop for W3C Semantic Web Health Care & Life Sciences, 2006 | 2 | 2006 |
