| geiger v2. 0: an expanded suite of methods for fitting macroevolutionary models to phylogenetic trees MW Pennell, JM Eastman, GJ Slater, JW Brown, JC Uyeda, RG FitzJohn, ... Bioinformatics 30 (15), 2216-2218, 2014 | 1202 | 2014 |
| Constructing a broadly inclusive seed plant phylogeny SA Smith, JW Brown American journal of botany 105 (3), 302-314, 2018 | 1090 | 2018 |
| BAMM tools: an R package for the analysis of evolutionary dynamics on phylogenetic trees DL Rabosky, M Grundler, C Anderson, P Title, JJ Shi, JW Brown, H Huang, ... Methods in Ecology and Evolution 5 (7), 701-707, 2014 | 990 | 2014 |
| Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants SA Smith, MJ Moore, JW Brown, Y Yang BMC evolutionary biology 15 (1), 150, 2015 | 520 | 2015 |
| rotl: an R package to interact with the Open Tree of Life data F Michonneau, JW Brown, DJ Winter Methods in Ecology and Evolution 7 (12), 1476-1481, 2016 | 502 | 2016 |
| Nested radiations and the pulse of angiosperm diversification: increased diversification rates often follow whole genome duplications DC Tank, JM Eastman, MW Pennell, PS Soltis, DE Soltis, CE Hinchliff, ... New Phytologist 207 (2), 454-467, 2015 | 398 | 2015 |
| Phyx: phylogenetic tools for unix JW Brown, JF Walker, SA Smith Bioinformatics 33 (12), 1886-1888, 2017 | 322 | 2017 |
| So many genes, so little time: A practical approach to divergence-time estimation in the genomic era SA Smith, JW Brown, JF Walker PloS one 13 (5), e0197433, 2018 | 295 | 2018 |
| Quartet Sampling distinguishes lack of support from conflicting support in the green plant tree of life JB Pease, JW Brown, JF Walker, CE Hinchliff, SA Smith American journal of botany 105 (3), 385-403, 2018 | 295 | 2018 |
| Beyond aridification: multiple explanations for the elevated diversification of cacti in the New World Succulent Biome T Hernández‐Hernández, JW Brown, BO Schlumpberger, LE Eguiarte, ... New phytologist 202 (4), 1382-1397, 2014 | 285 | 2014 |
| Goldilocks meets Santa Rosalia: an ephemeral speciation model explains patterns of diversification across time scales EB Rosenblum, BAJ Sarver, JW Brown, S Des Roches, KM Hardwick, ... Evolutionary Biology 39 (2), 255-261, 2012 | 254 | 2012 |
| Angiosperm phylogeny inferred from sequences of four mitochondrial genes YL QIU, L Li, B Wang, JY XUE, TA Hendry, RQ LI, JW Brown, Y Liu, ... Journal of Systematics and Evolution 48 (6), 391-425, 2010 | 245 | 2010 |
| Package ‘ape’ E Paradis, S Blomberg, B Bolker, J Brown, J Claude, HS Cuong, ... Analyses of phylogenetics and evolution, version 2 (4), 47, 2019 | 202 | 2019 |
| ape: Analyses of Phylogenetics and Evolution E Paradis, S Blomberg, B Bolker, J Brown, S Claramunt, J Claude, ... (No Title), 2002 | 162 | 2002 |
| A molecular genetic timescale for the diversification of autotrophic stramenopiles (Ochrophyta): substantive underestimation of putative fossil ages JW Brown, U Sorhannus PLoS One 5 (9), e12759, 2010 | 160 | 2010 |
| The past sure is tense: on interpreting phylogenetic divergence time estimates JW Brown, SA Smith Systematic Biology 67 (2), 340-353, 2018 | 100 | 2018 |
| Disparity, diversity, and duplications in the Caryophyllales SA Smith, JW Brown, Y Yang, R Bruenn, CP Drummond, SF Brockington, ... New Phytologist 217 (2), 836-854, 2018 | 95 | 2018 |
| Nuclear DNA does not reconcile ‘rocks’ and ‘clocks’ in Neoaves: a comment on Ericson et al. JW Brown, RB Payne, DP Mindell Biology Letters 3 (3), 257-260, 2007 | 95 | 2007 |
| Analyzing contentious relationships and outlier genes in phylogenomics JF Walker, JW Brown, SA Smith Systematic biology 67 (5), 916-924, 2018 | 93 | 2018 |
| Phylogenetic conflicts, combinability, and deep phylogenomics in plants SA Smith, N Walker-Hale, JF Walker, JW Brown Systematic Biology 69 (3), 579-592, 2020 | 78 | 2020 |
Stephen A. SmithProfessor, University of MichiganVerified email at umich.edu
