| Replicational dilution of H3K27me3 in mammalian cells and the role of poised promoters U Jadhav, E Manieri, K Nalapareddy, S Madha, S Chakrabarti, ... Molecular cell 78 (1), 141-151. e5, 2020 | 87 | 2020 |
| Pharmacokinetics and drug-interactions determine optimum combination strategies in computational models of cancer evolution S Chakrabarti, F Michor Cancer Research, 2017 | 86 | 2017 |
| Plasticity of hydrogen bond networks regulates mechanochemistry of cell adhesion complexes S Chakrabarti, M Hinczewski, D Thirumalai Proceedings of the National Academy of Sciences 111 (25), 9048-9053, 2014 | 69 | 2014 |
| Force-dependent switch in protein unfolding pathways and transition-state movements PI Zhuravlev, M Hinczewski, S Chakrabarti, S Marqusee, D Thirumalai Proceedings of the National Academy of Sciences of the United States of …, 2016 | 64 | 2016 |
| Phenomenological and microscopic theories for catch bonds S Chakrabarti, M Hinczewski, D Thirumalai Journal of structural biology 197 (1), 50-56, 2017 | 56 | 2017 |
| Hidden heterogeneity and circadian-controlled cell fate inferred from single cell lineages S Chakrabarti, AL Paek, J Reyes, KA Lasick, G Lahav, F Michor Nature Communications 9 (1), 5372, 2018 | 55 | 2018 |
| Currently available bulk sequencing data do not necessarily support a model of neutral tumor evolution TO McDonald, S Chakrabarti, F Michor Nature genetics 50 (12), 1620-1623, 2018 | 50 | 2018 |
| Molecular chaperones maximize the native state yield on biological times by driving substrates out of equilibrium S Chakrabarti, C Hyeon, X Ye, GH Lorimer, D Thirumalai Proceedings of the National Academy of Sciences 114 (51), E10919-E10927, 2017 | 47 | 2017 |
| Circadian clock effects on cellular proliferation: Insights from theory and experiments S Chakrabarti, F Michor Current Opinion in Cell Biology 67, 17-26, 2020 | 38 | 2020 |
| Identification of optimal dosing schedules of dacomitinib and osimertinib for a phase I/II trial in advanced EGFR-mutant non-small cell lung cancer KE Poels, AJ Schoenfeld, A Makhnin, Y Tobi, Y Wang, H Frisco-Cabanos, ... Nature Communications 12 (1), 3697, 2021 | 31 | 2021 |
| Discrete Step Sizes of Molecular Motors Lead to Bimodal Non-Gaussian Velocity Distributions under Force H Vu, S Chakrabarti, M Hinczewski, D Thirumalai Physical Review Letters 117 (7), 078101, 2016 | 31 | 2016 |
| Protein Collapse is Encoded in the Folded State Architecture HS Samanta, P Zhuravlev, M Hinczewski, N Hori, S Chakrabarti, ... Soft Matter 13 (19), 3622-3638, 2017 | 28 | 2017 |
| Helicase Processivity and Not the Unwinding Velocity Exhibits Universal Increase with Force D Pincus, S Chakrabarti, D Thirumalai Biophysical Joural 109 (2), 220-230, 2015 | 22 | 2015 |
| Processivity, Velocity, and Universal Characteristics of Nucleic Acid Unwinding by Helicases S Chakrabarti, C Jarzynski, D Thirumalai Biophysical journal 117 (5), 867-879, 2019 | 12 | 2019 |
| Timely questions emerging in Chronobiology: the Circadian Clock keeps on ticking S Chawla, J O’neill, MI Knight, Y He, L Wang, E Maronde, SG Rodríguez, ... Journal of circadian rhythms 22, 2, 2024 | 9 | 2024 |
| Reflections on several landmark advances in circadian biology S Chawla, H Oster, GE Duffield, E Maronde, ME Guido, C Chabot, ... Journal of circadian rhythms 22, 1, 2024 | 6 | 2024 |
| Diffusion controls local versus dispersed inheritance of histones during replication and shapes epigenomic architecture A Singh, S Chakrabarti PLOS Computational Biology 19 (12), 2023 | 5 | 2023 |
| An improved rhythmicity analysis method using Gaussian Processes detects cell-density dependent circadian oscillations in stem cells S Sahay, S Adhikari, S Hormoz, S Chakrabarti Bioinformatics 39 (10), 2023 | 3 | 2023 |
| Combining lineage correlations and a small molecule inhibitor to detect circadian control of the cell cycle A Nikhat, A Shaikh, S Chakrabarti iScience 28 (4), 2025 | 2 | 2025 |
| Unifying Theories in High-Dimensional Biology: Approaches, Challenges and Opportunities M Bauer, A Goyal, S Goyal, G Reddy, S Chakrabarti, MM Desai, W Gilpin, ... arXiv preprint arXiv:2512.10111, 2025 | 1 | 2025 |
Dave ThirumalaiUniversity of Texas at AustinVerified email at utexas.edu
