| Singular value decomposition and principal component analysis ME Wall, A Rechtsteiner, LM Rocha A practical approach to microarray data analysis, 91-109, 2003 | 2469* | 2003 |
| Computational fact checking from knowledge networks GL Ciampaglia, P Shiralkar, LM Rocha, J Bollen, F Menczer, A Flammini PLoS ONE 10 (6), e0128193. doi:10.1371/journal.pon, 2015 | 720 | 2015 |
| The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text M Krallinger, M Vazquez, F Leitner, D Salgado, A Chatr-Aryamontri, ... BMC bioinformatics 12 (Suppl 8), S3, 2011 | 203 | 2011 |
| Selected self-organization and the semiotics of evolutionary systems LM Rocha Evolutionary systems: Biological and epistemological perspectives on …, 1998 | 196 | 1998 |
| Control of complex networks requires both structure and dynamics AJ Gates, LM Rocha Scientific Reports 6 (24456), doi:10.1038/srep24456, 2016 | 171 | 2016 |
| Monitoring Potential Drug Interactions and Reactions via Network Analysis of Instagram User Timelines RB Correia, L Li, LM Rocha Pacific Symposium on Biocomputing 21, 492-503, 2016 | 115 | 2016 |
| Towards semiotic agent-based models of socio-technical organizations C Joslyn, L Rocha Proc. AI, Simulation and Planning in High Autonomy Systems (AIS 2000 …, 2000 | 115 | 2000 |
| Mining social media data for biomedical signals and health-related behavior RB Correia, IB Wood, J Bollen, LM Rocha Annual Review of Biomedical Data Science 3 (1), 433-458, 2020 | 97 | 2020 |
| Complex systems modeling: Using metaphors from nature in simulation and scientific models LM Rocha BITS: Computer and Communications News, 1999 | 95* | 1999 |
| The effective graph reveals redundancy, canalization, and control pathways in biochemical regulation and signaling LMR Alexander J. Gates, Rion Brattig Correia, Xuan Wang Proceedings of the National Academy of Sciences 118 (12), e2022598118, 2021 | 90 | 2021 |
| Evolution with material symbol systems LM Rocha Biosystems 60 (1-3), 95-121, 2001 | 86 | 2001 |
| Eigenbehavior and symbols LM Rocha Systems Research 13 (3), 371-384, 1996 | 82 | 1996 |
| Symbiotic Intelligence: self-organizing knowledge on distributed networks driven by human interaction N Johnson, S Rasmussen, C Joslyn, L Rocha, S Smith, M Kantor Proceedings of the 6th International Conference on Artificial Life, 403-407, 1998 | 76 | 1998 |
| Material representations: from the genetic code to the evolution of cellular automata LM Rocha, W Hordijk Artificial life 11 (1-2), 189-214, 2005 | 72 | 2005 |
| Canalization and control in automata networks: body segmentation in Drosophila melanogaster M Marques-Pita, LM Rocha PloS one 8 (3), e55946, 2013 | 69 | 2013 |
| Application of machine learning in postural control kinematics for the diagnosis of Alzheimer’s disease L Costa, MF Gago, D Yelshyna, J Ferreira, H David Silva, L Rocha, ... Computational intelligence and neuroscience 2016 (1), 3891253, 2016 | 67 | 2016 |
| Distance Closures on Complex Networks T Simas, LM Rocha Network Science 3 (2), 227-268. doi:10.1017/nws.201, 2015 | 65 | 2015 |
| Evidence Sets and Contextual Genetic Algorithms: Exploring uncertainty, context, and embodiment in cognitive and biological systems LM Rocha State University of New York at Binghamton, 1997 | 62 | 1997 |
| An integrated pharmacokinetics ontology and corpus for text mining HY Wu, S Karnik, A Subhadarshini, Z Wang, S Philips, X Han, C Chiang, ... BMC bioinformatics 14 (1), 35, 2013 | 60 | 2013 |
| Challenges and opportunities for digital twins in precision medicine from a complex systems perspective M De Domenico, L Allegri, G Caldarelli, V d’Andrea, B Di Camillo, ... npj Digital Medicine 8 (1), 37, 2025 | 56 | 2025 |
Rion Brattig CorreiaInstituto Gulbenkian de Ciência / CAPES FoundationVerified email at indiana.edu
