| QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ... PeerJ Preprints, 2018 | 23732* | 2018 |
| Staphylococcus aureus CC398: host adaptation and emergence of methicillin resistance in livestock LB Price, M Stegger, H Hasman, M Aziz, J Larsen, PS Andersen, ... MBio 3 (1), 10.1128/mbio. 00305-11, 2012 | 936 | 2012 |
| Yersinia pestis and the Plague of Justinian 541–543 AD: a genomic analysis DM Wagner, J Klunk, M Harbeck, A Devault, N Waglechner, JW Sahl, ... The Lancet infectious diseases 14 (4), 319-326, 2014 | 649 | 2014 |
| Global genetic population structure of Bacillus anthracis MN Van Ert, WR Easterday, LY Huynh, RT Okinaka, ME Hugh-Jones, ... PloS one 2 (5), e461, 2007 | 528 | 2007 |
| The Epidemic of Extended-Spectrum-β-Lactamase-Producing Escherichia coli ST131 Is Driven by a Single Highly Pathogenic Subclone, H30-Rx LB Price, JR Johnson, M Aziz, C Clabots, B Johnston, V Tchesnokova, ... MBio 4 (6), 10.1128/mbio. 00377-13, 2013 | 513 | 2013 |
| Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales P Keim, MN Van Ert, T Pearson, AJ Vogler, LY Huynh, DM Wagner Infection, Genetics and Evolution 4 (3), 205-213, 2004 | 415 | 2004 |
| Population genetics of Vibrio cholerae from Nepal in 2010: evidence on the origin of the Haitian outbreak RS Hendriksen, LB Price, JM Schupp, JD Gillece, RS Kaas, ... MBio 2 (4), 10.1128/mbio. 00157-11, 2011 | 354 | 2011 |
| Phylogenetic discovery bias in Bacillus anthracis using single-nucleotide polymorphisms from whole-genome sequencing T Pearson, JD Busch, J Ravel, TD Read, SD Rhoton, JM U'ren, ... Proceedings of the National Academy of Sciences 101 (37), 13536-13541, 2004 | 352 | 2004 |
| Whole-Genome-Based Phylogeny and Divergence of the Genus Brucella JT Foster, SM Beckstrom-Sternberg, T Pearson, JS Beckstrom-Sternberg, ... Journal of bacteriology 191 (8), 2864-2870, 2009 | 235 | 2009 |
| Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer T Pearson, P Giffard, S Beckstrom-Sternberg, R Auerbach, H Hornstra, ... BMC biology 7 (1), 78, 2009 | 222 | 2009 |
| Phylogeography of Francisella tularensis: Global Expansion of a Highly Fit Clone AJ Vogler, D Birdsell, LB Price, JR Bowers, SM Beckstrom-Sternberg, ... Journal of bacteriology 191 (8), 2474-2484, 2009 | 218 | 2009 |
| A Genomic Survey of Positive Selection in Burkholderia pseudomallei Provides Insights into the Evolution of Accidental Virulence T Nandi, C Ong, AP Singh, J Boddey, T Atkins, M Sarkar-Tyson, ... PLoS pathogens 6 (4), e1000845, 2010 | 163 | 2010 |
| Comparative phylogenomics and evolution of the Brucellae reveal a path to virulence AR Wattam, JT Foster, SP Mane, SM Beckstrom-Sternberg, ... Journal of bacteriology 196 (5), 920-930, 2014 | 161 | 2014 |
| In Vitro Selection and Characterization of Bacillus anthracis Mutants with High-Level Resistance to Ciprofloxacin LB Price, A Vogler, T Pearson, JD Busch, JM Schupp, P Keim Antimicrobial Agents and Chemotherapy 47 (7), 2362-2365, 2003 | 161 | 2003 |
| Strain-Specific Single-Nucleotide Polymorphism Assays for the Bacillus anthracis Ames Strain MN Van Ert, WR Easterday, TS Simonson, JM U'Ren, T Pearson, ... Journal of clinical microbiology 45 (1), 47-53, 2007 | 158 | 2007 |
| Phylogenetic understanding of clonal populations in an era of whole genome sequencing T Pearson, RT Okinaka, JT Foster, P Keim Infection, Genetics and Evolution 9 (5), 1010-1019, 2009 | 152 | 2009 |
| Continuing Evolution of Burkholderia mallei Through Genome Reduction and Large-Scale Rearrangements L Losada, CM Ronning, D DeShazer, D Woods, N Fedorova, ... Genome biology and evolution 2, 102-116, 2010 | 145 | 2010 |
| Critical knowledge gaps in our understanding of environmental cycling and transmission of Leptospira spp V Barragan, S Olivas, P Keim, T Pearson Applied and environmental microbiology 83 (19), e01190-17, 2017 | 139 | 2017 |
| Bacillus anthracis in China and its relationship to worldwide lineages TS Simonson, RT Okinaka, B Wang, WR Easterday, L Huynh, JM U'Ren, ... BMC microbiology 9 (1), 71, 2009 | 127 | 2009 |
| Within-host evolution of Burkholderia pseudomallei over a twelve-year chronic carriage infection EP Price, DS Sarovich, M Mayo, A Tuanyok, KP Drees, M Kaestli, ... MBio 4 (4), 10.1128/mbio. 00388-13, 2013 | 125 | 2013 |
Paul KeimRegents Professor, Northern Arizona University, TGen, Pathogen and MicrobiomeVerified email at nau.edu
