| Benchmarked approaches for reconstruction of in vitro cell lineages and in silico models of C. elegans and M. musculus developmental trees W Gong, AA Granados, J Hu, MG Jones, O Raz, I Salvador-Martínez, ... Cell systems 12 (8), 810-826. e4, 2021 | 64 | 2021 |
| A generic, cost-effective, and scalable cell lineage analysis platform T Biezuner, A Spiro, O Raz, S Amir, L Milo, R Adar, N Chapal-Ilani, ... Genome research 26 (11), 1588-1599, 2016 | 53 | 2016 |
| Comparison of seven single cell whole genome amplification commercial kits using targeted sequencing T Biezuner, O Raz, S Amir, L Milo, R Adar, Y Fried, E Ainbinder, E Shapiro Scientific reports 11 (1), 17171, 2021 | 46 | 2021 |
| Synthesis and cell-free cloning of DNA libraries using programmable microfluidics TB Yehezkel, A Rival, O Raz, R Cohen, Z Marx, M Camara, JF Dubern, ... Nucleic acids research 44 (4), e35-e35, 2016 | 41 | 2016 |
| Short tandem repeat stutter model inferred from direct measurement of in vitro stutter noise O Raz, T Biezuner, A Spiro, S Amir, L Milo, A Titelman, A Onn, ... Nucleic Acids Research 47 (5), 2436-2445, 2019 | 32 | 2019 |
| Time-aligned hourglass gastrulation models in rabbit and mouse Y Mayshar, O Raz, S Cheng, R Ben-Yair, R Hadas, N Reines, ... Cell 186 (12), 2610-2627. e18, 2023 | 29 | 2023 |
| Retrospective cell lineage reconstruction in humans by using short tandem repeats L Tao, O Raz, Z Marx, MS Ghosh, S Huber, J Greindl-Junghans, ... Cell reports methods 1 (3), 2021 | 26 | 2021 |
| Heuristic for maximizing DNA reuse in synthetic DNA library assembly J Blakes, O Raz, U Feige, J Bacardit, P Widera, T Ben-Yehezkel, ... ACS synthetic biology 3 (8), 529-542, 2014 | 23 | 2014 |
| DNA-library assembly programmed by on-demand nano-liter droplets from a custom microfluidic chip U Tangen, GAS Minero, A Sharma, PF Wagler, R Cohen, O Raz, T Marx, ... Biomicrofluidics 9 (4), 2015 | 21 | 2015 |
| A duplex MIPs-based biological-computational cell lineage discovery platform L Tao, O Raz, Z Marx, T Biezuner, S Amir, L Milo, R Adar, A Onn, ... BioRxiv, 191 296-191 296, 2017 | 8 | 2017 |
| MCProj: metacell projection for interpretable and quantitative use of transcriptional atlases O Ben-Kiki, A Bercovich, A Lifshitz, O Raz, D Brook, A Tanay Genome Biology 24 (1), 220, 2023 | 6 | 2023 |
| Whole-genome amplification—surveying yield, reproducibility, and heterozygous balance, reported by STR-targeting MIPs O Raz, L Tao, T Biezuner, T Marx, Y Neumeier, N Tumanyan, E Shapiro International journal of molecular sciences 23 (11), 6161, 2022 | 4 | 2022 |
| A biological-computational human cell lineage discovery platform based on duplex molecular inversion probes L Tao, O Raz, Z Marx, T Biezuner, S Amir, L Milo, R Adar, A Onn, ... BioRxiv 18, 191296, 2018 | 3 | 2018 |
| A new algorithm for combinatorial dna library assembly J Blakes, O Raz, N Krasnogor, E Shapiro 5th International Workshop on Bio-Design Automation (IWBDA 2013), 2013 | 2 | 2013 |
| Tracking Somatic Mutations for Lineage Reconstruction Y Neumeier, O Raz, L Tao, Z Marx, E Shapiro Lineage Tracing: Methods and Protocols, 23-45, 2025 | 1 | 2025 |
| Efficient acquisition of tens of thousands of short tandem repeats in single-cell whole-genome-amplified DNA L Tao, Z Marx, O Raz, E Shapiro STAR protocols 2 (4), 100828, 2021 | 1 | 2021 |
| GMP-like and MLP-like Subpopulations of Hematopoietic Stem and Progenitor Cells Harboring Mutated EZH2 and TP53 at Diagnosis Promote Acute Myeloid … T Shahar Gabay, N Stolero, N Rabhun, R Sabah, O Raz, Y Neumeier, ... International Journal of Molecular Sciences 26 (9), 4224, 2025 | | 2025 |
| Unraveling at Diagnosis Chemoresistant Relapse-Initiating Clones in Acute Myeloid Leukemia: Combined Functional and Genomic Analyses Using Single-Cell-Derived Hematopoietic … T Zuckerman, T Gabay, N Stolero, N Rabhun, R Sabah, O Raz, ... Blood, The Journal of the American Society of Hematology 140 (Supplement 1 …, 2022 | | 2022 |
| Computational methods for the construction, editing, and error correction of DNA molecules and their libraries O Raz, TB Yehezkel Computational Methods in Synthetic Biology, 337-352, 2014 | | 2014 |
Ehud ShapiroProfessor Emeritus, Weizmann Institute, Visiting Professor, London School of EconomicsVerified email at weizmann.ac.il
