| Fast and highly sensitive full-length single-cell RNA sequencing using FLASH-seq V Hahaut, D Pavlinic, W Carbone, S Schuierer, P Balmer, M Quinodoz, ... Nature biotechnology 40 (10), 1447-1451, 2022 | 126 | 2022 |
| Cis-perturbation of cancer drivers by the HTLV-1/BLV proviruses is an early determinant of leukemogenesis N Rosewick, M Artesi, K Durkin, A Marçais, V Hahaut, P Griebel, N Arsic, ... Nature Communications 8, 2017 | 111 | 2017 |
| Characterization of novel Bovine Leukemia Virus (BLV) antisense transcripts by deep sequencing reveals constitutive expression in tumors and transcriptional interaction with … K Durkin, N Rosewick, M Artesi, V Hahaut, P Griebel, N Arsic, A Burny, ... Retrovirology 13 (1), 33, 2016 | 104 | 2016 |
| HTLV-1 infection promotes excessive T cell activation and transformation into adult T cell leukemia/lymphoma BJY Tan, K Sugata, O Reda, M Matsuo, K Uchiyama, P Miyazato, ... The Journal of Clinical Investigation 131 (24), 2021 | 77 | 2021 |
| PCIP-seq: simultaneous sequencing of integrated viral genomes and their insertion sites with long reads M Artesi*, V Hahaut*, B Cole*, L Lambrechts, F Ashrafi, A Marçais, ... Genome Biology 22 (1), 1-24, 2021 | 48 | 2021 |
| Targeted deep sequencing reveals clonal and subclonal mutational signatures in Adult T-cell leukemia/lymphoma and defines an unfavorable indolent subtype A Marçais, L Lhermitte, M Artesi, C Laurent, K Durkin, V Hahaut, ... Leukemia 35 (3), 764-776, 2021 | 44 | 2021 |
| Monitoring molecular response in adult T-cell leukemia by high-throughput sequencing analysis of HTLV-1 clonality M Artesi, A Marçais, K Durkin, N Rosewick, V Hahaut, F Suarez, ... Leukemia 31 (11), 2532-2535, 2017 | 32 | 2017 |
| PDZ domain-binding motif of Tax sustains T-cell proliferation in HTLV-1-infected humanized mice E Pérès, J Blin, EP Ricci, M Artesi, V Hahaut, A Van den Broeke, A Corbin, ... Plos Pathogens, 2018 | 30 | 2018 |
| NK cells and monocytes modulate primary HTLV-1 infection R Moles, S Sarkis, V Galli, M Omsland, M Artesi, M Bissa, K McKinnon, ... PLoS Pathogens 18 (4), e1010416, 2022 | 25 | 2022 |
| Full-length single-cell RNA-sequencing with FLASH-seq V Hahaut, S Picelli Single cell transcriptomics: methods and protocols, 123-164, 2022 | 15 | 2022 |
| Detection of elusive DNA copy-number variations in hereditary disease and cancer through the use of noncoding and off-target sequencing reads M Quinodoz, K Kaminska, F Cancellieri, JH Han, VG Peter, E Celik, ... The American Journal of Human Genetics 111 (4), 701-713, 2024 | 14 | 2024 |
| An improved sequencing-based bioinformatics pipeline to track the distribution and clonal architecture of proviral integration sites N Rosewick*, V Hahaut*, K Durkin, M Artesi, S Karpe, J Wayet, P Griebel, ... Frontiers in Microbiology 11, 2020 | 14 | 2020 |
| Cell type-focused compound screen in human organoids reveals CK1 and MAPK11 inhibition protects cone photoreceptors from death SE Spirig, VJ Arteaga-Moreta, Z Raics, S Posada-Céspedes, S Chreng, ... bioRxiv, 2023.10. 09.561525, 2023 | 4 | 2023 |
| Cell type-focused compound screen in human organoids reveals molecules and pathways controlling cone photoreceptor death SE Spirig, VJ Arteaga-Moreta, Z Raics, S Posada-Cespedes, S Chreng, ... Investigative Ophthalmology & Visual Science 65 (7), 1551-1551, 2024 | 2 | 2024 |
| Pooled CRISPR Inverse PCR sequencing (PCIP-seq): simultaneous sequencing of retroviral insertion points and the associated provirus in thousands of cells with long reads 558130 M Artesi, V Hahaut, F Ashrafi, A Marçais, O Hermine, P Griebel, N Arsic, ... | 1 | 2019 |
| A viral clonality evenness score to predict progression to adult T-cell leukaemia in asymptomatic carriers of human T-lymphotropic virus type 1 in Japan: a retrospective … SD Karpe, M Artesi, J Wayet, K Durkin, V Hahaut, K Uchimaru, ... The Lancet Microbe 6 (11), 2025 | | 2025 |
| OS02-08 Total DRUG-seq: Cost-efficient HTTx Platform Enabling Gene Isoforms and non-coding RNA Analysis for MoA Discovery and Risk Assessment D Alpern, S Placzek, M Vallez, AB Hoang, B Ahmet, V Hahaut, A Coudray Toxicology Letters 411, S57-S58, 2025 | | 2025 |
| OFF-PEAK: Detection of copy number variants using noncoding and off-target NGS reads in Mendelian conditions and in cancer M Quinodoz, K Kaminska, F Cancellieri, JH Han, V Peter, E Celik, ... EUROPEAN JOURNAL OF HUMAN GENETICS 32, 1628-1628, 2024 | | 2024 |
| Bulk FLASH-seq V Hahaut, S Picelli, RA Siwicki | | 2023 |
| Pooled Crispr Inverse PCR Sequencing (PCIP-Seq): Simultaneous Sequencing of Viral Insertion Points and the Integrated Viral Genomes with Long Reads K Durkin, M Artesi, A Van Den Broeke, V Bours, V Hahaut, M Georges US Patent App. 17/781,980, 2023 | | 2023 |