| BUSCO update: novel and streamlined workflows along with broader and deeper phylogenetic coverage for scoring of eukaryotic, prokaryotic, and viral genomes M Manni, MR Berkeley, M Seppey, FA Simao, EM Zdobnov Molecular Biology and Evolution 38 (10), 4647–4654, 2021 | 5634 | 2021 |
| BUSCO: assessing genome assembly and annotation completeness M Seppey, M Manni, EM Zdobnov Gene prediction: methods and protocols, 227-245, 2019 | 2263 | 2019 |
| BUSCO applications from quality assessments to gene prediction and phylogenomics RM Waterhouse, M Seppey, FA Simão, M Manni, P Ioannidis, ... Molecular biology and evolution 35 (3), 543-548, 2018 | 2241 | 2018 |
| OrthoDB v10: sampling the diversity of animal, plant, fungal, protist, bacterial and viral genomes for evolutionary and functional annotations of orthologs EV Kriventseva, D Kuznetsov, F Tegenfeldt, M Manni, R Dias, FA Simão, ... Nucleic acids research 47 (D1), D807-D811, 2019 | 1152 | 2019 |
| BUSCO: Assessing Genomic Data Quality and Beyond M Manni, MR Berkeley, M Seppey, EM Zdobnov Current Protocols 1 (12), e323, 2021 | 1130 | 2021 |
| OrthoDB v11: annotation of orthologs in the widest sampling of organismal diversity D Kuznetsov, F Tegenfeldt, M Manni, M Seppey, M Berkeley, ... Nucleic Acids Research 51 (D1), D445-D451, 2023 | 476 | 2023 |
| Gene prediction: methods and protocols M Seppey, M Manni, EM Zdobnov, M Kollmar Methods Mol. Biol 1962, 227-245, 2019 | 215 | 2019 |
| OrthoDB in 2020: evolutionary and functional annotations of orthologs EM Zdobnov, D Kuznetsov, F Tegenfeldt, M Manni, M Berkeley, ... Nucleic Acids Research 49 (D1), D389-D393, 2021 | 212 | 2021 |
| The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species A Papanicolaou, MF Schetelig, P Arensburger, PW Atkinson, JB Benoit, ... Genome biology 17 (1), 1-31, 2016 | 194 | 2016 |
| Genetic evidence for a worldwide chaotic dispersion pattern of the arbovirus vector, Aedes albopictus M Manni, CR Guglielmino, F Scolari, A Vega-Rúa, AB Failloux, ... PLOS Neglected Tropical Diseases 11 (1), e0005332, 2017 | 139 | 2017 |
| OrthoDB and BUSCO update: annotation of orthologs with wider sampling of genomes F Tegenfeldt, D Kuznetsov, M Manni, M Berkeley, EM Zdobnov, ... Nucleic Acids Research 53 (D1), D516-D522, 2025 | 119 | 2025 |
| Molecular markers for analyses of intraspecific genetic diversity in the Asian Tiger mosquito, Aedes albopictus M Manni, LM Gomulski, N Aketarawong, G Tait, F Scolari, P Somboon, ... Parasites & vectors 8 (1), 188, 2015 | 103 | 2015 |
| Vector competence of Aedes albopictus populations for chikungunya virus is shaped by their demographic history A Vega-Rúa, M Marconcini, Y Madec, M Manni, D Carraretto, ... Communications Biology 3 (1), 1-13, 2020 | 95 | 2020 |
| Genomic Features of the Damselfly Calopteryx splendens Representing a Sister Clade to Most Insect Orders P Ioannidis, FA Simao, RM Waterhouse, M Manni, M Seppey, ... Genome Biology and Evolution 9 (2), 415-430, 2017 | 87 | 2017 |
| Sniffing out chemosensory genes from the Mediterranean fruit fly, Ceratitis capitata P Siciliano, F Scolari, LM Gomulski, M Falchetto, M Manni, P Gabrieli, ... PloS one 9 (1), e85523, 2014 | 59 | 2014 |
| A draft genome sequence of an invasive mosquito: an Italian Aedes albopictus V Dritsou, P Topalis, N Windbichler, A Simoni, A Hall, D Lawson, ... Pathogens and global health 109 (5), 207-220, 2015 | 56 | 2015 |
| Transcriptional profiles of mating-responsive genes from testes and male accessory glands of the Mediterranean fruit fly, Ceratitis capitata F Scolari, LM Gomulski, JMC Ribeiro, P Siciliano, A Meraldi, M Falchetto, ... PLoS One 7 (10), 2012 | 52 | 2012 |
| The oriental fruitfly Bactrocera dorsalis ss in East Asia: disentangling the different forces promoting the invasion and shaping the genetic make-up of populations N Aketarawong, CR Guglielmino, N Karam, M Falchetto, M Manni, ... Genetica 142 (3), 201-213, 2014 | 48 | 2014 |
| Importance of mosquito “quasispecies” in selecting an epidemic arthropod-borne virus M Vazeille, K Zouache, A Vega-Rúa, JM Thiberge, V Caro, A Yébakima, ... Scientific reports 6 (1), 1-12, 2016 | 38 | 2016 |
| Relevant genetic differentiation among Brazilian populations of Anastrepha fraterculus (Diptera, Tephritidae) M Manni, KM Lima, CR Guglielmino, SB Lanzavecchia, M Juri, T Vera, ... ZooKeys, 157, 2015 | 31 | 2015 |
Zdobnov EMUniversity of Geneva Medical School and Swiss Institute of Bioinformatics, Switzerland.Verified email at unige.ch
