| Effect of bubble formation on the dissociation of methane hydrate in water: A molecular dynamics study T Yagasaki, M Matsumoto, Y Andoh, S Okazaki, H Tanaka The Journal of Physical Chemistry B 118 (7), 1900-1906, 2014 | 159 | 2014 |
| MODYLAS: A highly parallelized general-purpose molecular dynamics simulation program for large-scale systems with long-range forces calculated by fast multipole method (FMM … Y Andoh, N Yoshii, K Fujimoto, K Mizutani, H Kojima, A Yamada, ... Journal of Chemical Theory and Computation 9 (7), 3201-3209, 2013 | 131 | 2013 |
| All-atom molecular dynamics calculation study of entire poliovirus empty capsids in solution Y Andoh, N Yoshii, A Yamada, K Fujimoto, H Kojima, K Mizutani, ... The Journal of chemical physics 141 (16), 165101, 2014 | 93 | 2014 |
| Dissociation of methane hydrate in aqueous NaCl solutions T Yagasaki, M Matsumoto, Y Andoh, S Okazaki, H Tanaka The journal of physical chemistry B 118 (40), 11797-11804, 2014 | 91 | 2014 |
| Molecular dynamics study of lipid bilayers modeling the plasma membranes of normal murine thymocytes and leukemic GRSL cells Y Andoh, S Okazaki, R Ueoka Biochimica et Biophysica Acta (BBA)-Biomembranes 1828 (4), 1259-1270, 2013 | 61 | 2013 |
| All-Atom Molecular Dynamics Study of a Spherical Micelle Composed of N-Acetylated Poly(ethylene glycol)−Poly(γ-benzyl l-glutamate) Block Copolymers: A … H Kuramochi, Y Andoh, N Yoshii, S Okazaki The Journal of Physical Chemistry B 113 (46), 15181-15188, 2009 | 49 | 2009 |
| Hydrogen-bonded clusters on the vapor/ethanol-aqueous-solution interface Y Andoh, K Yasuoka The Journal of Physical Chemistry B 110 (46), 23264-23273, 2006 | 35 | 2006 |
| Detailed Structural Analysis of a Self‐Assembled Vesicular Amphiphilic NCN‐Pincer Palladium Complex by Using Wide‐Angle X‐Ray Scattering and Molecular Dynamics Calculations G Hamasaka, T Muto, Y Andoh, K Fujimoto, K Kato, M Takata, S Okazaki, ... Chemistry–A European Journal 23 (6), 1291-1298, 2017 | 18 | 2017 |
| Two-dimensional supercritical behavior of an ethanol monolayer: a molecular dynamics study Y Andoh, K Yasuoka Langmuir 21 (23), 10885-10894, 2005 | 18 | 2005 |
| Anisotropic molecular clustering in liquid ethanol induced by a charged fully hydroxylated silicon dioxide (SiO2) surface Y Andoh, K Kurahashi, H Sakuma, K Yasuoka, K Kurihara Chemical Physics Letters 448 (4-6), 253-257, 2007 | 16 | 2007 |
| A molecular dynamics study of the lateral free energy profile of a pair of cholesterol molecules as a function of their distance in phospholipid bilayers Y Andoh, K Oono, S Okazaki, I Hatta The Journal of chemical physics 136 (15), 155104, 2012 | 15 | 2012 |
| Molecular dynamics study of lipid bilayers modeling the plasma membranes of mouse hepatocytes and hepatomas Y Andoh, N Aoki, S Okazaki The Journal of Chemical Physics 144 (8), 2016 | 13 | 2016 |
| Evaluation of atomic pressure in the multiple time‐step integration algorithm Y Andoh, N Yoshii, A Yamada, S Okazaki Journal of Computational Chemistry 38 (10), 704-713, 2017 | 11 | 2017 |
| An exa-scale high-performance molecular dynamics simulation program: MODYLAS Y Andoh, S Ishikawa, T Sakashita, K Fujimoto, N Yoshii, T Nagai, Z Tang, ... The Journal of Chemical Physics 158, 194803, 2023 | 10 | 2023 |
| Algorithm to minimize MPI communications in the parallelized fast multipole method combined with molecular dynamics calculations Y Andoh, S Ichikawa, T Sakashita, N Yoshii, S Okazaki Journal of Computational Chemistry 42 (15), 1073-1087, 2021 | 9 | 2021 |
| Structure of Hydrated Crystal (Lc), Tilted Gel (Lβ′), and Liquid Crystal (Lα) Phases of Linear Alkylbenzene Sulfonate (LAS) Studied by X-ray Diffraction and Molecular Dynamics … K Takeda, Y Andoh, W Shinoda, S Okazaki Langmuir 35 (27), 9011-9019, 2019 | 9 | 2019 |
| MODYLAS: A highly parallelized general‐purpose molecular dynamics simulation program N Yoshii, Y Andoh, K Fujimoto, H Kojima, A Yamada, S Okazaki International Journal of Quantum Chemistry 115 (5), 342-348, 2015 | 8 | 2015 |
| Molecular Behavior of Linear Alkylbenzene Sulfonate in Hydrated Crystal, Tilted Gel, and Liquid Crystal Phases Studied by Molecular Dynamics Simulation K Takeda, Y Andoh, W Shinoda, S Okazaki Langmuir 35 (33), 10877-10884, 2019 | 7 | 2019 |
| Extension of the fast multipole method for the rectangular cells with an anisotropic partition tree structure Y Andoh, N Yoshii, S Okazaki Journal of Computational Chemistry 41 (14), 1353-1367, 2020 | 6 | 2020 |
| Difference in molecular mechanisms governing changes in membrane properties of phospholipid bilayers induced by addition of nonionic and zwitterionic surfactants Y Andoh, S Kitou, S Okazaki Journal of Molecular Liquids 271 (1), 933-941, 2018 | 6 | 2018 |
Noriyuki YoshiiNagoya UniversityVerified email at ccs.engg.nagoya-u.ac.jp
