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Aleksandra Gruca
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Applications of machine learning in human microbiome studies: a review on feature selection, biomarker identification, disease prediction and treatment
LJ Marcos-Zambrano, K Karaduzovic-Hadziabdic, T Loncar Turukalo, ...
Frontiers in microbiology 12, 634511, 2021
4232021
Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases
OK Tørresen, B Star, P Mier, MA Andrade-Navarro, A Bateman, P Jarnot, ...
Nucleic acids research 47 (21), 10994-11006, 2019
3752019
Disentangling the complexity of low complexity proteins
P Mier, L Paladin, S Tamana, S Petrosian, B Hajdu-Soltész, A Urbanek, ...
Briefings in Bioinformatics 21 (2), 458-472, 2020
1062020
PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins
P Jarnot, J Ziemska-Legiecka, L Dobson, M Merski, P Mier, ...
Nucleic acids research 48 (W1), W77-W84, 2020
512020
Advancing microbiome research with machine learning: key findings from the ML4Microbiome COST action
D D’Elia, J Truu, L Lahti, M Berland, G Papoutsoglou, M Ceci, A Zomer, ...
Frontiers in Microbiology 14, 1257002, 2023
332023
The surprising efficiency of framing geo-spatial time series forecasting as a video prediction task–insights from the iarai traffic4cast competition at neurips 2019
DP Kreil, MK Kopp, D Jonietz, M Neun, A Gruca, P Herruzo, H Martin, ...
NeurIPS 2019 competition and demonstration track, 232-241, 2020
332020
High-resolution multi-channel weather forecasting–First insights on transfer learning from the Weather4cast Competitions 2021
P Herruzo, A Gruca, L Lliso, X Calbet, P Rípodas, S Hochreiter, M Kopp, ...
2021 IEEE International Conference on Big Data (Big Data), 5750-5757, 2021
292021
Traffic4cast at neurips 2020-yet more on the unreasonable effectiveness of gridded geo-spatial processes
M Kopp, D Kreil, M Neun, D Jonietz, H Martin, P Herruzo, A Gruca, ...
NeurIPS 2020 Competition and Demonstration Track, 325-343, 2021
282021
Proteome profiles of different types of thyroid cancers
M Gawin, A Wojakowska, M Pietrowska, Ł Marczak, M Chekan, K Jelonek, ...
Molecular and cellular endocrinology 472, 68-79, 2018
282018
Traffic4cast at neurips 2021-temporal and spatial few-shot transfer learning in gridded geo-spatial processes
C Eichenberger, M Neun, H Martin, P Herruzo, M Spanring, Y Lu, S Choi, ...
NeurIPS 2021 Competitions and Demonstrations Track, 97-112, 2022
262022
Quantitative conformational analysis of functionally important electrostatic interactions in the intrinsically disordered region of delta subunit of bacterial RNA polymerase
V Kubáň, P Srb, H Stegnerova, P Padrta, M Zachrdla, Z Jasenakova, ...
Journal of the American Chemical Society 141 (42), 16817-16828, 2019
252019
Deep learning in microbiome analysis: a comprehensive review of neural network models
P Przymus, K Rykaczewski, A Martín-Segura, J Truu, ...
Frontiers in microbiology 15, 1516667, 2025
232025
Insights from analyses of low complexity regions with canonical methods for protein sequence comparison
P Jarnot, J Ziemska-Legiecka, M Grynberg, A Gruca
Briefings in Bioinformatics 23 (5), bbac299, 2022
222022
Induction and selection of the most interesting Gene Ontology based multiattribute rules for descriptions of gene groups
M Sikora, A Gruca
Pattern Recognition Letters 32 (2), 258-269, 2011
222011
Weather4cast at neurips 2022: Super-resolution rain movie prediction under spatio-temporal shifts
A Gruca, F Serva, L Lliso, P Rípodas, X Calbet, P Herruzo, J Pihrt, ...
NeurIPS 2022 competition track, 292-313, 2023
202023
Applications of machine learning in human microbiome studies: a review on feature selection, biomarker identification, disease prediction and treatment. Front Microbiol 12: 634511
LJ Marcos-Zambrano, K Karaduzovic-Hadziabdic, T Loncar Turukalo, ...
202021
RuleGO: a logical rules-based tool for description of gene groups by means of Gene Ontology
A Gruca, M Sikora, A Polanski
Nucleic acids research 39 (suppl_2), W293-W301, 2011
202011
CDCEO'21-First Workshop on Complex Data Challenges in Earth Observation
A Gruca, P Herruzo, P Rípodas, A Kucik, C Briese, MK Kopp, S Hochreiter, ...
Proceedings of the 30th ACM International Conference on Information …, 2021
192021
Performance Analysis of. NET Based Object–Relational Mapping Frameworks
A Gruca, P Podsiadło
International Conference: Beyond Databases, Architectures and Structures, 40-49, 2014
172014
Common low complexity regions for SARS-CoV-2 and human proteomes as potential multidirectional risk factor in vaccine development
A Gruca, J Ziemska-Legiecka, P Jarnot, E Sarnowska, TJ Sarnowski, ...
BMC bioinformatics 22 (1), 182, 2021
142021
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