| Analysis of the microbiome: Advantages of whole genome shotgun versus 16S amplicon sequencing R Ranjan, A Rani, A Metwally, HS McGee, DL Perkins Biochemical and biophysical research communications 469 (4), 967-977, 2016 | 1194 | 2016 |
| Longitudinal multi-omics of host–microbe dynamics in prediabetes W Zhou, MR Sailani, K Contrepois, Y Zhou, S Ahadi, SR Leopold, ... Nature 569 (7758), 663-671, 2019 | 606 | 2019 |
| Pre-symptomatic detection of COVID-19 from smartwatch data T Mishra*, M Wang*, AA Metwally*, GK Bogu*, AW Brooks*, A Bahmani*, ... Nature biomedical engineering 4 (12), 1208-1220, 2020 | 530 | 2020 |
| Molecular choreography of acute exercise K Contrepois, S Wu, KJ Moneghetti, D Hornburg, S Ahadi, MS Tsai, ... Cell 181 (5), 1112-1130. e16, 2020 | 478 | 2020 |
| Dynamic lipidome alterations associated with human health, disease and ageing D Hornburg, S Wu, M Moqri, X Zhou, K Contrepois, N Bararpour, ... Nature metabolism 5 (9), 1578-1594, 2023 | 213 | 2023 |
| Real-time alerting system for COVID-19 and other stress events using wearable data A Alavi, GK Bogu, M Wang, ES Rangan, AW Brooks, Q Wang, E Higgs, ... Nature medicine 28 (1), 175-184, 2022 | 161 | 2022 |
| COVID-19–induced new-onset diabetes: trends and technologies AA Metwally, P Mehta, BS Johnson, A Nagarjuna, MP Snyder Diabetes 70 (12), 2733-2744, 2021 | 111 | 2021 |
| PopPhy-CNN: a phylogenetic tree embedded architecture for convolutional neural networks to predict host phenotype from metagenomic data D Reiman, AA Metwally, J Sun, Y Dai IEEE journal of biomedical and health informatics 24 (10), 2993-3001, 2020 | 107 | 2020 |
| Effect of the obesity epidemic on kidney transplantation: obesity is independent of diabetes as a risk factor for adverse renal transplant outcomes JM Kwan, Z Hajjiri, A Metwally, PW Finn, DL Perkins PloS one 11 (11), e0165712, 2016 | 90 | 2016 |
| Serotonin transporter deficiency is associated with dysbiosis and changes in metabolic function of the mouse intestinal microbiome M Singhal, BA Turturice, CR Manzella, R Ranjan, AA Metwally, J Theorell, ... Scientific reports 9 (1), 2138, 2019 | 81 | 2019 |
| Rare penetrant mutations confer severe risk of common diseases PP Fiziev, J McRae, JC Ulirsch, JS Dron, T Hamp, Y Yang, P Wainschtein, ... Science 380 (6648), eabo1131, 2023 | 72 | 2023 |
| A diverse virome in kidney transplant patients contains multiple viral subtypes with distinct polymorphisms A Rani, R Ranjan, HS McGee, A Metwally, Z Hajjiri, DC Brennan, PW Finn, ... Scientific reports 6 (1), 33327, 2016 | 72 | 2016 |
| Utilizing longitudinal microbiome taxonomic profiles to predict food allergy via long short-term memory networks AA Metwally, PS Yu, D Reiman, Y Dai, PW Finn, DL Perkins PLoS computational biology 15 (2), e1006693, 2019 | 65 | 2019 |
| Using convolutional neural networks to explore the microbiome D Reiman*, A Metwally*, Y Dai 2017 39th annual international conference of the IEEE engineering in …, 2017 | 65 | 2017 |
| MetaLonDA: a flexible R package for identifying time intervals of differentially abundant features in metagenomic longitudinal studies AA Metwally, J Yang, C Ascoli, Y Dai, PW Finn, DL Perkins Microbiome 6 (1), 32, 2018 | 59 | 2018 |
| Deep longitudinal multiomics profiling reveals two biological seasonal patterns in California MR Sailani*, AA Metwally*, W Zhou, SMSF Rose, S Ahadi, K Contrepois, ... Nature communications 11 (1), 1-12, 2020 | 54 | 2020 |
| Chromatin accessibility associates with protein-RNA correlation in human cancer A Sanghi, JJ Gruber, A Metwally, L Jiang, W Reynolds, J Sunwoo, L Orloff, ... Nature communications 12 (1), 5732, 2021 | 49 | 2021 |
| Early detection of COVID-19 using a smartwatch T Mishra*, M Wang*, AA Metwally*, GK Bogu*, AW Brooks*, A Bahmani*, ... MedRxiv, 2020.07. 06.20147512, 2020 | 48 | 2020 |
| Prediction of metabolic subphenotypes of type 2 diabetes via continuous glucose monitoring and machine learning AA Metwally, D Perelman, H Park, Y Wu, A Jha, S Sharp, A Celli, E Ayhan, ... Nature biomedical engineering 9 (8), 1222-1239, 2025 | 46* | 2025 |
| Bronchiolitis obliterans syndrome susceptibility and the pulmonary microbiome C Schott, SS Weigt, BA Turturice, A Metwally, J Belperio, PW Finn, ... The Journal of Heart and Lung Transplantation 37 (9), 1131-1140, 2018 | 39 | 2018 |
Michael SnyderStanford UniversityVerified email at stanford.edu
