| Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle EF Kirkness, BJ Haas, W Sun, HR Braig, MA Perotti, JM Clark, SH Lee, ... Proceedings of the National Academy of Sciences 107 (27), 12168-12173, 2010 | 609 | 2010 |
| Sequencing of Culex quinquefasciatus Establishes a Platform for Mosquito Comparative Genomics P Arensburger, K Megy, RM Waterhouse, J Abrudan, P Amedeo, B Antelo, ... Science 330 (6000), 86-88, 2010 | 575 | 2010 |
| VectorBase: a data resource for invertebrate vector genomics D Lawson, P Arensburger, P Atkinson, NJ Besansky, RV Bruggner, ... Nucleic acids research 37 (suppl_1), D583-D587, 2009 | 272 | 2009 |
| A topological analysis of the open souce software development community J Xu, Y Gao, S Christley, G Madey Proceedings of the 38th Annual Hawaii International Conference on System …, 2005 | 243 | 2005 |
| Human genomes as email attachments S Christley, Y Lu, C Li, X Xie Bioinformatics 25 (2), 274-275, 2009 | 216 | 2009 |
| iReceptor: a platform for querying and analyzing antibody/B‐cell and T‐cell receptor repertoire data across federated repositories BD Corrie, N Marthandan, B Zimonja, J Jaglale, Y Zhou, E Barr, ... Immunological reviews 284 (1), 24-41, 2018 | 188 | 2018 |
| Intestinal anastomotic injury alters spatially defined microbiome composition and function BD Shogan, DP Smith, S Christley, JA Gilbert, O Zaborina, JC Alverdy Microbiome 2 (1), 35, 2014 | 182 | 2014 |
| TCRMatch: predicting T-cell receptor specificity based on sequence similarity to previously characterized receptors WD Chronister, A Crinklaw, S Mahajan, R Vita, Z Koşaloğlu-Yalçın, Z Yan, ... Frontiers in immunology 12, 640725, 2021 | 175 | 2021 |
| Fecal microbiota transplant rescues mice from human pathogen mediated sepsis by restoring systemic immunity SM Kim, JR DeFazio, SK Hyoju, K Sangani, R Keskey, MA Krezalek, ... Nature communications 11 (1), 2354, 2020 | 156 | 2020 |
| VectorBase: a home for invertebrate vectors of human pathogens D Lawson, P Arensburger, P Atkinson, NJ Besansky, RV Bruggner, ... Nucleic acids research 35 (suppl_1), D503-D505, 2007 | 151 | 2007 |
| Biophysicochemical motifs in T-cell receptor sequences distinguish repertoires from tumor-infiltrating lymphocyte and adjacent healthy tissue J Ostmeyer, S Christley, IT Toby, LG Cowell Cancer research 79 (7), 1671-1680, 2019 | 114 | 2019 |
| Reproducibility and reuse of adaptive immune receptor repertoire data F Breden, ET Luning Prak, B Peters, F Rubelt, CA Schramm, CE Busse, ... Frontiers in immunology 8, 1418, 2017 | 112 | 2017 |
| AIRR community standardized representations for annotated immune repertoires JA Vander Heiden, S Marquez, N Marthandan, SAC Bukhari, CE Busse, ... Frontiers in immunology 9, 2206, 2018 | 104 | 2018 |
| Optimization and control of agent-based models in biology: a perspective G An, BG Fitzpatrick, S Christley, P Federico, A Kanarek, RM Neilan, ... Bulletin of mathematical biology 79 (1), 63-87, 2017 | 101 | 2017 |
| Patterns of mesenchymal condensation in a multiscale, discrete stochastic model S Christley, MS Alber, SA Newman PLoS computational biology 3 (4), e76, 2007 | 98 | 2007 |
| Parameter inference for discretely observed stochastic kinetic models using stochastic gradient descent Y Wang, S Christley, E Mjolsness, X Xie BMC systems biology 4 (1), 99, 2010 | 94 | 2010 |
| The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires M Pavlović, L Scheffer, K Motwani, C Kanduri, R Kompova, N Vazov, ... Nature Machine Intelligence 3 (11), 936-944, 2021 | 92 | 2021 |
| Integrative multicellular biological modeling: a case study of 3D epidermal development using GPU algorithms S Christley, B Lee, X Dai, Q Nie BMC systems biology 4 (1), 107, 2010 | 89 | 2010 |
| Application of social network analysis to the study of open source software J Xu, S Christley, G Madey The economics of open source software development, 247-269, 2006 | 89 | 2006 |
| Mapping the immunogenic landscape of near-native HIV-1 envelope trimers in non-human primates CA Cottrell, J van Schooten, CA Bowman, M Yuan, D Oyen, M Shin, ... PLoS pathogens 16 (8), e1008753, 2020 | 85 | 2020 |
Lindsay CowellProfessor, O'Donnell School of Public Health, University of Texas Southwestern MedicalVerified email at utsouthwestern.edu
