| User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability PA Yushkevich, J Piven, HC Hazlett, RG Smith, S Ho, JC Gee, G Gerig Neuroimage 31 (3), 1116-1128, 2006 | 10615 | 2006 |
| N4ITK: improved N3 bias correction NJ Tustison, BB Avants, PA Cook, Y Zheng, A Egan, PA Yushkevich, ... IEEE transactions on medical imaging 29 (6), 1310-1320, 2010 | 7351 | 2010 |
| Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain BB Avants, CL Epstein, M Grossman, JC Gee Medical image analysis 12 (1), 26-41, 2008 | 6810 | 2008 |
| A reproducible evaluation of ANTs similarity metric performance in brain image registration BB Avants, NJ Tustison, G Song, PA Cook, A Klein, JC Gee Neuroimage 54 (3), 2033-2044, 2011 | 5540 | 2011 |
| Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration A Klein, J Andersson, BA Ardekani, J Ashburner, B Avants, MC Chiang, ... Neuroimage 46 (3), 786-802, 2009 | 2856 | 2009 |
| Advanced normalization tools (ANTS) BB Avants, N Tustison, G Song Insight j 2 (365), 1-35, 2009 | 2576 | 2009 |
| A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain Z Yao, CTJ Van Velthoven, M Kunst, M Zhang, D McMillen, C Lee, W Jung, ... Nature 624 (7991), 317-332, 2023 | 937 | 2023 |
| Spatial transformations of diffusion tensor magnetic resonance images DC Alexander, C Pierpaoli, PJ Basser, JC Gee IEEE transactions on medical imaging 20 (11), 1131-1139, 2002 | 866 | 2002 |
| Large-scale evaluation of ANTs and FreeSurfer cortical thickness measurements NJ Tustison, PA Cook, A Klein, G Song, SR Das, JT Duda, BM Kandel, ... Neuroimage 99, 166-179, 2014 | 817 | 2014 |
| The Insight ToolKit image registration framework BB Avants, NJ Tustison, M Stauffer, G Song, B Wu, JC Gee Frontiers in neuroinformatics 8, 44, 2014 | 810 | 2014 |
| The optimal template effect in hippocampus studies of diseased populations BB Avants, P Yushkevich, J Pluta, D Minkoff, M Korczykowski, J Detre, ... Neuroimage 49 (3), 2457-2466, 2010 | 781 | 2010 |
| An Open Source Multivariate Framework for n-Tissue Segmentation with Evaluation on Public Data BB Avants, NJ Tustison, J Wu, PA Cook, JC Gee Neuroinformatics 9 (4), 381-400, 2011 | 693 | 2011 |
| Deformable registration of diffusion tensor MR images with explicit orientation optimization H Zhang, PA Yushkevich, DC Alexander, JC Gee Medical image analysis 10 (5), 764-785, 2006 | 606 | 2006 |
| Early stress is associated with alterations in the orbitofrontal cortex: a tensor-based morphometry investigation of brain structure and behavioral risk JL Hanson, MK Chung, BB Avants, EA Shirtcliff, JC Gee, RJ Davidson, ... Journal of neuroscience 30 (22), 7466-7472, 2010 | 598 | 2010 |
| Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge K Murphy, B Van Ginneken, JM Reinhardt, S Kabus, K Ding, X Deng, ... IEEE transactions on medical imaging 30 (11), 1901-1920, 2011 | 553 | 2011 |
| An fMRI study of sex differences in regional activation to a verbal and a spatial task RC Gur, D Alsop, D Glahn, R Petty, CL Swanson, JA Maldjian, BI Turetsky, ... Brain and language 74 (2), 157-170, 2000 | 543 | 2000 |
| Geodesic estimation for large deformation anatomical shape averaging and interpolation B Avants, JC Gee Neuroimage 23, S139-S150, 2004 | 535 | 2004 |
| Elastically deforming a three-dimensional atlas to match anatomical brain images JC Gee, M Reivich, R Bajcsy | 534 | 1993 |
| A multimodal cell census and atlas of the mammalian primary motor cortex Principal manuscript editors, Analysis coordination, ... Nature 598 (7879), 86-102, 2021 | 441 | 2021 |
| What’s in a name: voxel‐based morphometric analyses of MRI and naming difficulty in Alzheimer’s disease, frontotemporal dementia and corticobasal degeneration M Grossman, C McMillan, P Moore, L Ding, G Glosser, M Work, J Gee Brain 127 (3), 628-649, 2004 | 434 | 2004 |
