| Genomic analysis of the causative agents of coccidiosis in domestic chickens AJ Reid, DP Blake, HR Ansari, K Billington, HP Browne, J Bryant, M Dunn, ... Genome research 24 (10), 1676-1685, 2014 | 248 | 2014 |
| Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea H Alzubaidy, M Essack, TB Malas, A Bokhari, O Motwalli, FK Kamanu, ... Gene 576 (2), 626-636, 2016 | 190 | 2016 |
| The evolutionary dynamics of variant antigen genes in Babesia reveal a history of genomic innovation underlying host–parasite interaction AP Jackson, TD Otto, A Darby, A Ramaprasad, D Xia, IE Echaide, ... Nucleic acids research 42 (11), 7113-7131, 2014 | 124 | 2014 |
| Genomic expression catalogue of a global collection of BCG vaccine strains show evidence for highly diverged metabolic and cell-wall adaptations AM Abdallah, GA Hill-Cawthorne, TD Otto, F Coll, JA Guerra-Assunção, ... Scientific reports 5 (1), 15443, 2015 | 113 | 2015 |
| Comprehensive transcriptome analysis of fluid shear stress altered gene expression in renal epithelial cells SJ Kunnen, TB Malas, CM Semeins, AD Bakker, DJM Peters Journal of cellular physiology 233 (4), 3615-3628, 2018 | 68 | 2018 |
| Nanopublications: a growing resource of provenance-centric scientific linked data T Kuhn, A Meroño-Peñuela, A Malic, JH Poelen, AH Hurlbert, EC Ortiz, ... 2018 IEEE 14th International Conference on e-Science (e-Science), 83-92, 2018 | 56 | 2018 |
| Drug prioritization using the semantic properties of a knowledge graph TB Malas, WJ Vlietstra, R Kudrin, S Starikov, M Charrout, M Roos, ... Scientific reports 9 (1), 6281, 2019 | 54 | 2019 |
| Early career researchers want Open Science A Farnham, C Kurz, MA Öztürk, M Solbiati, O Myllyntaus, J Meekes, ... Genome biology 18 (1), 221, 2017 | 50 | 2017 |
| Comprehensive Evaluation of Toxoplasma gondii VEG and Neospora caninum LIV Genomes with Tachyzoite Stage Transcriptome and Proteome Defines Novel … A Ramaprasad, T Mourier, R Naeem, TB Malas, E Moussa, A Panigrahi, ... Plos one 10 (4), e0124473, 2015 | 45 | 2015 |
| Meta-analysis of polycystic kidney disease expression profiles defines strong involvement of injury repair processes TB Malas, C Formica, WN Leonhard, P Rao, Z Granchi, M Roos, ... American Journal of Physiology-Renal Physiology 312 (4), F806-F817, 2017 | 40 | 2017 |
| Prioritization of novel ADPKD drug candidates from disease-stage specific gene expression profiles TB Malas, WN Leonhard, H Bange, Z Granchi, KM Hettne, ... EBioMedicine 51, 2020 | 34 | 2020 |
| Integrated transcriptomic and proteomic analysis of pathogenic mycobacteria and their esx-1 mutants reveal secretion-dependent regulation of ESX-1 substrates and WhiB6 as a … AM Abdallah, EM Weerdenburg, Q Guan, R Ummels, S Borggreve, ... Plos one 14 (1), e0211003, 2019 | 34 | 2019 |
| Comparative transcriptomics of shear stress treated Pkd1−/− cells and pre-cystic kidneys reveals pathways involved in early polycystic kidney disease SJ Kunnen, TB Malas, C Formica, WN Leonhard, P AC’t Hoen, ... Biomedicine & Pharmacotherapy 108, 1123-1134, 2018 | 27 | 2018 |
| Characterisation of transcription factor profiles in polycystic kidney disease (PKD): identification and validation of STAT3 and RUNX1 in the injury/repair response and PKD … C Formica, T Malas, J Balog, L Verburg, PAC ‘t Hoen, DJM Peters Journal of Molecular Medicine 97 (12), 1643-1656, 2019 | 17 | 2019 |
| DESM: portal for microbial knowledge exploration systems A Salhi, M Essack, A Radovanovic, B Marchand, S Bougouffa, A Antunes, ... Nucleic acids research 44 (D1), D624-D633, 2016 | 14 | 2016 |
| Genomic expression catalogue of a global collection of BCG vaccine strains show evidence for highly diverged metabolic and cell-wall adaptations. Sci Rep 5: 15443 AM Abdallah, GA Hill-Cawthorne, TD Otto, F Coll, JA Guerra-Assunção, ... | 13 | 2015 |
| Computational tools for genome-wide miRNA prediction and study T B Malas, T Ravasi The Open Biology Journal 5 (1), 2012 | 5 | 2012 |
| Drug repurposing using a semantic knowledge graph TB Malas, R Kudrin, S Starikov, PAC ́ʼt Hoen, DJM Peters, M Roos, ... Data Driven Knowl. Discov. Polycyst. Kidney, 75, 2021 | 4 | 2021 |
| Meta-analysis of polycystic kidney disease expression profiles defines strong involvement of injury repair processes (vol 312, pg F806, 2017) TB Malas, C Formica, WN Leonhard, P Rao, Z Granchi, M Roos, ... American Journal of Physiology-Renal Physiology 314 (1), F140-F140, 2018 | 3 | 2018 |
| Semantic Knowledge Graph Network Features for Drug Repurposing. TB Malas, R Kudrin, S Starikov, D Peters, M Roos, P AC't Hoen, ... SWAT4LS, 2017 | 1 | 2017 |
