| Global overview and major challenges of host prediction methods for uncultivated phages C Coclet, S Roux Current opinion in virology 49, 117-126, 2021 | 117 | 2021 |
| Viruses interact with hosts that span distantly related microbial domains in dense hydrothermal mats Y Hwang, S Roux, C Coclet, SJE Krause, PR Girguis Nature Microbiology 8 (5), 946-957, 2023 | 89 | 2023 |
| Changes in bacterioplankton communities resulting from direct and indirect interactions with trace metal gradients in an urbanized marine coastal area C Coclet, C Garnier, G Durrieu, D Omanović, S D’onofrio, C Le Poupon, ... Frontiers in microbiology 10, 257, 2019 | 64 | 2019 |
| Trace metal contamination as a toxic and structuring factor impacting ultraphytoplankton communities in a multicontaminated Mediterranean coastal area C Coclet, C Garnier, F Delpy, D Jamet, G Durrieu, C Le Poupon, M Mayer, ... Progress in oceanography 163, 196-213, 2018 | 58 | 2018 |
| Microbial nitrogen cycling in Antarctic soils M Ortiz, J Bosch, C Coclet, J Johnson, P Lebre, A Salawu-Rotimi, ... Microorganisms 8 (9), 1442, 2020 | 57 | 2020 |
| Virus diversity and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem C Coclet, PO Sorensen, U Karaoz, S Wang, EL Brodie, EA Eloe-Fadrosh, ... Microbiome 11 (1), 237, 2023 | 55 | 2023 |
| Long-term monitoring emphasizes impacts of the dredging on dissolved Cu and Pb contamination along with ultraplankton distribution and structure in Toulon Bay (NW Mediterranean … N Layglon, B Misson, G Durieu, C Coclet, S d'Onofrio, DH Dang, ... Marine pollution bulletin 156, 111196, 2020 | 36 | 2020 |
| Trace metal contamination impacts predicted functions more than structure of marine prokaryotic biofilm communities in an anthropized coastal area C Coclet, C Garnier, S D’onofrio, G Durrieu, E Pasero, C Le Poupon, ... Frontiers in microbiology 12, 589948, 2021 | 33 | 2021 |
| Impacts of copper and lead exposure on prokaryotic communities from contaminated contrasted coastal seawaters: the influence of previous metal exposure C Coclet, C Garnier, G Durrieu, S D'onofrio, N Layglon, JF Briand, ... FEMS microbiology ecology 96 (6), fiaa048, 2020 | 22 | 2020 |
| Temporal dynamics of microbial transcription in wetted hyperarid desert soils C León-Sobrino, JB Ramond, C Coclet, RM Kapitango, G Maggs-Kölling, ... FEMS Microbiology Ecology 100 (3), fiae009, 2024 | 15 | 2024 |
| Expanding Antarctic biogeography: microbial ecology of Antarctic island soils PH Lebre, J Bosch, C Coclet, R Hallas, ID Hogg, J Johnson, KL Moon, ... Ecography 2023 (9), e06568, 2023 | 15 | 2023 |
| MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomes C Coclet, AP Camargo, S Roux Msystems 9 (10), e00888-24, 2024 | 12 | 2024 |
| Viromics approaches for the study of viral diversity and ecology in microbiomes S Roux, C Coclet Nature Reviews Genetics, 1-15, 2025 | 7 | 2025 |
| Viruses interact with hosts that span distantly related microbial domains in dense hydrothermal mats. Nat Microbiol 8: 946–957 Y Hwang, S Roux, C Coclet, SJE Krause, PR Girguis | 7 | 2023 |
| Microbial nitrogen cycling in Antarctic soils. Microorganisms 8 (9), 1442 M Ortiz, J Bosch, C Coclet, J Johnson, P Lebre, A Salawu-Rotimi, ... | 7 | 2020 |
| Survival under Stress: Microbial Adaptation in Hot Desert Soils C Coclet, D Cowan, PH Lebre Microbiology of Hot Deserts, 293-317, 2022 | 6 | 2022 |
| Microbial nitrogen cycling in Antarctic soils. Microorganisms 8: 1442 M Ortiz, J Bosch, C Coclet, J Johnson, P Lebre, A Salawu-Rotimi, ... | 6 | 2020 |
| Impacts de la contamination multiple en éléments traces métalliques sur les communautés microbiennes dans un environnement côtier fortement anthropisé: la rade de Toulon C Coclet Université de Toulon, 2019 | 4 | 2019 |
| ggtaxplot v 0.0. 1 C Coclet, S Roux Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States …, 2025 | | 2025 |
| Multi-choice Viromics Pipeline (MVP) v1 S Roux, C Coclet Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States), 2023 | | 2023 |
Simon RouxDOE Joint Genome InstituteVerified email at lbl.gov
