| Intrinsic rates and activation free energies from single-molecule pulling experiments OK Dudko, G Hummer, A Szabo Physical review letters 96 (10), 108101, 2006 | 1028 | 2006 |
| Theory, analysis, and interpretation of single-molecule force spectroscopy experiments OK Dudko, G Hummer, A Szabo Proceedings of the National Academy of Sciences 105 (41), 15755-15760, 2008 | 820 | 2008 |
| Global analysis of X-chromosome dosage compensation V Gupta, M Parisi, D Sturgill, R Nuttall, M Doctolero, OK Dudko, JD Malley, ... Journal of biology 5 (1), 3, 2006 | 349 | 2006 |
| Beyond the conventional description of dynamic force spectroscopy of adhesion bonds OK Dudko, AE Filippov, J Klafter, M Urbakh Proceedings of the National Academy of Sciences 100 (20), 11378-11381, 2003 | 317 | 2003 |
| 3D trajectories adopted by coding and regulatory DNA elements: first-passage times for genomic interactions JS Lucas, Y Zhang, OK Dudko, C Murre Cell 158 (2), 339-352, 2014 | 249 | 2014 |
| Extracting kinetics from single-molecule force spectroscopy: nanopore unzipping of DNA hairpins OK Dudko, J Mathé, A Szabo, A Meller, G Hummer Biophysical journal 92 (12), 4188-4195, 2007 | 241 | 2007 |
| Pulling direction as a reaction coordinate for the mechanical unfolding of single molecules RB Best, E Paci, G Hummer, OK Dudko The Journal of Physical Chemistry B 112 (19), 5968-5976, 2008 | 165 | 2008 |
| Single-molecule rupture dynamics on multidimensional landscapes Y Suzuki, OK Dudko Physical review letters 104 (4), 048101, 2010 | 150 | 2010 |
| Chromosome dynamics near the sol-gel phase transition dictate the timing of remote genomic interactions N Khanna, Y Zhang, JS Lucas, OK Dudko, C Murre Nature communications 10 (1), 2771, 2019 | 137 | 2019 |
| Dynamic force spectroscopy: a Fokker–Planck approach OK Dudko, AE Filippov, J Klafter, M Urbakh Chemical Physics Letters 352 (5-6), 499-504, 2002 | 121 | 2002 |
| Locating the barrier for folding of single molecules under an external force OK Dudko, TGW Graham, RB Best Physical review letters 107 (20), 208301, 2011 | 102 | 2011 |
| First-passage processes in the genome Y Zhang, OK Dudko Annual review of biophysics 45 (1), 117-134, 2016 | 78 | 2016 |
| Time-dependent diffusion coefficients in periodic porous materials OK Dudko, AM Berezhkovskii, GH Weiss The Journal of Physical Chemistry B 109 (45), 21296-21299, 2005 | 76 | 2005 |
| Diffusion in the presence of periodically spaced permeable membranes OK Dudko, AM Berezhkovskii, GH Weiss The Journal of chemical physics 121 (22), 11283-11288, 2004 | 66 | 2004 |
| Distinguishing signatures of multipathway conformational transitions CA Pierse, OK Dudko Physical review letters 118 (8), 088101, 2017 | 65 | 2017 |
| A transformation for the mechanical fingerprints of complex biomolecular interactions Y Zhang, OK Dudko Biophysical Journal 106 (2), 237a, 2014 | 65 | 2014 |
| Decoding the mechanical fingerprints of biomolecules OK Dudko Quarterly reviews of biophysics 49, e3, 2016 | 61 | 2016 |
| Biomolecules under mechanical stress: a simple mechanism of complex behavior Y Suzuki, OK Dudko The Journal of chemical physics 134 (6), 2011 | 55 | 2011 |
| Rate constant for diffusion-influenced ligand binding to receptors of arbitrary shape on a cell surface OK Dudko, AM Berezhkovskii, GH Weiss The Journal of chemical physics 121 (3), 1562-1565, 2004 | 47 | 2004 |
| Single-molecule mechanics: new insights from the escape-over-a-barrier problem OK Dudko Proceedings of the National Academy of Sciences 106 (22), 8795-8796, 2009 | 46 | 2009 |
