| Prediction of susceptibility to first-line tuberculosis drugs by DNA sequencing CRyPTIC Consortium and the 100,000 Genomes Project New England Journal of Medicine 379 (15), 1403-1415, 2018 | 399 | 2018 |
| Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020 E Alm, EK Broberg, T Connor, EB Hodcroft, AB Komissarov, ... Eurosurveillance 25 (32), 2001410, 2020 | 282 | 2020 |
| High-resolution mapping of tuberculosis transmission: Whole genome sequencing and phylogenetic modelling of a cohort from Valencia Region, Spain Y Xu, I Cancino-Muñoz, M Torres-Puente, LM Villamayor, R Borrás, ... PLoS medicine 16 (10), e1002961, 2019 | 112 | 2019 |
| The first wave of the COVID-19 epidemic in Spain was associated with early introductions and fast spread of a dominating genetic variant MG López, Á Chiner-Oms, D García de Viedma, P Ruiz-Rodriguez, ... Nature genetics 53 (10), 1405-1414, 2021 | 87 | 2021 |
| Whole-genome sequencing of Mycobacterium tuberculosis directly from clinical samples for high-resolution genomic epidemiology and drug resistance surveillance: an observational … GA Goig, I Cancino-Muñoz, M Torres-Puente, LM Villamayor, D Navarro, ... The Lancet Microbe 1 (4), e175-e183, 2020 | 73 | 2020 |
| Whole genomic sequencing as a tool for diagnosis of drug and multidrug-resistance tuberculosis in an endemic region in Mexico CF Madrazo-Moya, I Cancino-Muñoz, B Cuevas-Cordoba, ... PLoS One 14 (6), e0213046, 2019 | 43 | 2019 |
| Cryptic resistance mutations associated with misdiagnoses of multidrug-resistant tuberculosis I Cancino-Muñoz, M Moreno-Molina, V Furió, GA Goig, M Torres-Puente, ... The Journal of Infectious Diseases 220 (2), 316-320, 2019 | 35 | 2019 |
| SARS-CoV-2 outbreak on a Spanish mink farm: epidemiological, molecular, and pathological studies JJ Badiola, A Otero, E Sevilla, B Marín, M García Martínez, M Betancor, ... Frontiers in Veterinary Science 8, 805004, 2022 | 32 | 2022 |
| Population-based sequencing of Mycobacterium tuberculosis reveals how current population dynamics are shaped by past epidemics I Cancino-Muñoz, MG López, M Torres-Puente, LM Villamayor, R Borrás, ... Elife 11, e76605, 2022 | 31 | 2022 |
| CRyPTIC Consortium and the 100,000 Genomes Project. 2018 C Allix-Béguec, I Arandjelovic, L Bi, P Beckert, M Bonnet, P Bradley, ... Prediction of susceptibility to first-line tuberculosis drugs by DNA …, 0 | 22 | |
| Whole genomic sequencing based genotyping reveals a specific X3 sublineage restricted to Mexico and related with multidrug resistance AC Jiménez-Ruano, CF Madrazo-Moya, I Cancino-Muñoz, ... Scientific reports 11 (1), 1870, 2021 | 20 | 2021 |
| Role of the first WHO mutation catalogue in the diagnosis of antibiotic resistance in Mycobacterium tuberculosis in the Valencia Region, Spain: a retrospective genomic analysis AM García-Marín, I Cancino-Muñoz, M Torres-Puente, LM Villamayor, ... The Lancet Microbe 5 (1), e43-e51, 2024 | 16 | 2024 |
| Uso de las tecnologías de secuenciación masiva para el diagnóstico y epidemiología de enfermedades infecciosas I Comas, I Cancino-Muñoz, C Mariner-Llicer, GA Goig, P Ruiz-Hueso, ... Enfermedades Infecciosas y Microbiología Clínica 38, 32-38, 2020 | 14 | 2020 |
| Development and application of affordable SNP typing approaches to genotype Mycobacterium tuberculosis complex strains in low and high burden countries I Cancino-Muñoz, A Gil-Brusola, M Torres-Puente, C Mariner-Llicer, ... Scientific reports 9 (1), 15343, 2019 | 12 | 2019 |
| Fine-grain population structure and transmission patterns of Mycobacterium tuberculosis in southern Mozambique, a high TB/HIV burden area B Saavedra Cervera, MG López, Á Chiner-Oms, AM García, ... Microbial Genomics 8 (7), 000844, 2022 | 11 | 2022 |
| Evolutionary and phenotypic characterization of two spike mutations in European lineage 20E of SARS-CoV-2 P Ruiz-Rodriguez, C Francés-Gómez, Á Chiner-Oms, MG López, ... Mbio 12 (6), e02315-21, 2021 | 10 | 2021 |
| Genotypic and phenotypic characterisation of a nosocomial outbreak of Candida auris in Spain during 5 years JV Mulet‐Bayona, I Cancino‐Muñoz, C Salvador‐García, N Tormo‐Palop, ... Mycoses 67 (8), e13776, 2024 | 8 | 2024 |
| Characterization of polymorphisms associated with multidrug-resistant tuberculosis by whole genomic sequencing: A preliminary report from Mexico R Zenteno-Cuevas, E Fernandez, D Viveros, CF Madrazo-Moya, ... Microbial Drug Resistance 26 (7), 732-740, 2020 | 7 | 2020 |
| Whole genome sequencing analysis to evaluate the influence of T2DM on polymorphisms associated with drug resistance in M. tuberculosis GA Bermudez-Hernández, DE Pérez-Martínez, CF Madrazo-Moya, ... BMC genomics 23 (1), 465, 2022 | 5 | 2022 |
| SNPs in Genes Related to DNA Damage Repair in Mycobacterium Tuberculosis: Their Association with Type 2 Diabetes Mellitus and Drug Resistance DE Pérez-Martínez, GA Bermúdez-Hernández, CF Madrazo-Moya, ... Genes 13 (4), 609, 2022 | 5 | 2022 |
