| Wisdom of crowds for robust gene network inference D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ... Nature methods 9 (8), 796-804, 2012 | 2034 | 2012 |
| Metabolite-enabled eradication of bacterial persisters by aminoglycosides KR Allison, MP Brynildsen, JJ Collins Nature 473 (7346), 216-220, 2011 | 1173 | 2011 |
| Antibiotics induce redox-related physiological alterations as part of their lethality DJ Dwyer, PA Belenky, JH Yang, IC MacDonald, JD Martell, N Takahashi, ... Proceedings of the National Academy of Sciences 111 (20), E2100-E2109, 2014 | 1070 | 2014 |
| Signaling-mediated bacterial persister formation NM Vega, KR Allison, AS Khalil, JJ Collins Nature chemical biology 8 (5), 431-433, 2012 | 521 | 2012 |
| Heterogeneous bacterial persisters and engineering approaches to eliminate them KR Allison, MP Brynildsen, JJ Collins Current opinion in microbiology 14 (5), 593-598, 2011 | 248 | 2011 |
| Salmonella typhimurium intercepts Escherichia coli signaling to enhance antibiotic tolerance NM Vega, KR Allison, AN Samuels, MS Klempner, JJ Collins Proceedings of the National Academy of Sciences 110 (35), 14420-14425, 2013 | 221 | 2013 |
| Potentiating aminoglycoside antibiotics to reduce their toxic side effects CR Rosenberg, X Fang, KR Allison PLoS One 15 (9), e0237948, 2020 | 84 | 2020 |
| Resuscitation dynamics reveal persister partitioning after antibiotic treatment X Fang, KR Allison Molecular systems biology 19 (4), e11320, 2023 | 21 | 2023 |
| Evidence of a possible multicellular life cycle in Escherichia coli D Puri, X Fang, KR Allison iScience 26 (1), 105795, 2023 | 20 | 2023 |
| Bacteria as control engineers KR Allison, JJ Collins Molecular Cell 41 (1), 4-5, 2011 | 6 | 2011 |
| Escherichia coli self-organizes developmental rosettes D Puri, KR Allison Proceedings of the National Academy of Sciences 121 (23), e2315850121, 2024 | 5 | 2024 |
| Fluorescence-based protocol for revealing cellular arrangement in biofilms D Puri, X Fang, KR Allison STAR protocols 4 (2), 102270, 2023 | 5 | 2023 |
| A synthetic biology approach to sequential stripe patterning and somitogenesis F Wu, C He, X Fang, J Baez, T Ohnmacht, Q Zhang, X Chen, KR Allison, ... BioRxiv, 825406, 2019 | 4 | 2019 |
| Reply to Blair et al.: Dose-dependent effects and oxidative stress responses in antibiotic tolerance in Salmonella typhimurium NM Vega, KR Allison, AN Samuels, MS Klempner, JJ Collins Proceedings of the National Academy of Sciences 110 (48), E4570-E4570, 2013 | 4 | 2013 |
| Multicellular dynamics and wealth distribution in bacteria KR Allison Molecular Systems Biology 20 (8), 845-847, 2024 | 2 | 2024 |
| Multicellular self-organization in Escherichia coli D Puri, KR Allison arXiv preprint arXiv:2503.03001, 2025 | 1 | 2025 |
| Multicellular control of gene networks KR Allison arXiv preprint arXiv:2508.11783, 2025 | | 2025 |
| Metabolite dependence of antibiotic susceptibility in a gut microbe KR Allison Msphere 9 (10), e00600-24, 2024 | | 2024 |
James J CollinsMIT; Wyss Institute, Harvard; Broad Institute of MIT & HarvardVerified email at mit.edu
