| The healthy human microbiome J Lloyd-Price, G Abu-Ali, C Huttenhower Genome medicine 8 (1), 51, 2016 | 2420 | 2016 |
| Sequencing and beyond: integrating molecular'omics' for microbial community profiling EA Franzosa, T Hsu, A Sirota-Madi, A Shafquat, G Abu-Ali, XC Morgan, ... Nature Reviews Microbiology 13 (6), 360-372, 2015 | 848 | 2015 |
| Lactobacillus-deficient cervicovaginal bacterial communities are associated with increased HIV acquisition in young South African women C Gosmann, SA Handley, M Farcasanu, G Abu-Ali, BA Bowman, ... Immunity 46 (1), 29-37, 2017 | 704 | 2017 |
| Assessment of variation in microbial community amplicon sequencing by the Microbiome Quality Control (MBQC) project consortium R Sinha, G Abu-Ali, E Vogtmann, AA Fodor, B Ren, A Amir, E Schwager, ... Nature biotechnology 35 (11), 1077-1086, 2017 | 540 | 2017 |
| bioBakery: a meta’omic analysis environment LJ McIver, G Abu-Ali, EA Franzosa, R Schwager, XC Morgan, L Waldron, ... Bioinformatics 34 (7), 1235-1237, 2018 | 372 | 2018 |
| Stability of the human faecal microbiome in a cohort of adult men RS Mehta, GS Abu-Ali, DA Drew, J Lloyd-Price, A Subramanian, ... Nature microbiology 3 (3), 347-355, 2018 | 308 | 2018 |
| Metatranscriptome of human faecal microbial communities in a cohort of adult men GS Abu-Ali, RS Mehta, J Lloyd-Price, H Mallick, T Branck, KL Ivey, ... Nature microbiology 3 (3), 356-366, 2018 | 244 | 2018 |
| The role of gut microbiome in the pathogenesis of prostate cancer: a prospective, pilot study DM Golombos, A Ayangbesan, P O'Malley, P Lewicki, LM Barlow, ... Urology 111, 122-128, 2018 | 230 | 2018 |
| Association between sulfur-metabolizing bacterial communities in stool and risk of distal colorectal cancer in men LH Nguyen, W Ma, DD Wang, Y Cao, H Mallick, TK Gerbaba, ... Gastroenterology 158 (5), 1313-1325, 2020 | 170 | 2020 |
| Urban transit system microbial communities differ by surface type and interaction with humans and the environment T Hsu, R Joice, J Vallarino, G Abu-Ali, EM Hartmann, A Shafquat, ... Msystems 1 (3), 10.1128/msystems. 00018-16, 2016 | 134 | 2016 |
| Faecal metabolome and its determinants in inflammatory bowel disease AV Vila, S Hu, S Andreu-Sánchez, V Collij, BH Jansen, HE Augustijn, ... Gut 72 (8), 1472-1485, 2023 | 132 | 2023 |
| The healthy human microbiome. Genome Med 8: 51 J Lloyd-Price, G Abu-Ali, C Huttenhower | 124 | 2016 |
| Pathogenesis of Renal Disease Due to Enterohemorrhagic Escherichia coli in Germ-Free Mice KA Eaton, DI Friedman, GJ Francis, JS Tyler, VB Young, J Haeger, ... Infection and immunity 76 (7), 3054-3063, 2008 | 114 | 2008 |
| The human gut microbiota in people with amyotrophic lateral sclerosis K Nicholson, K Bjornevik, G Abu-Ali, J Chan, M Cortese, B Dedi, M Jeon, ... Amyotrophic Lateral Sclerosis and Frontotemporal Degeneration 22 (3-4), 186-194, 2021 | 111 | 2021 |
| Increased adherence and expression of virulence genes in a lineage of Escherichia coli O157: H7 commonly associated with human infections GS Abu-Ali, LM Ouellette, ST Henderson, DW Lacher, JT Riordan, ... PloS one 5 (4), e10167, 2010 | 97 | 2010 |
| Correlation between In Vivo Biofilm Formation and Virulence Gene Expression in Escherichia coli O104:H4 RA Safadi, GS Abu-Ali, RE Sloup, JT Rudrik, CM Waters, KA Eaton, ... PloS one 7 (7), e41628, 2012 | 89 | 2012 |
| Shiga toxin 2 overexpression in Escherichia coli O157: H7 strains associated with severe human disease M Neupane, GS Abu-Ali, A Mitra, DW Lacher, SD Manning, JT Riordan Microbial pathogenesis 51 (6), 466-470, 2011 | 86 | 2011 |
| Sex differences in pulmonary responses to ozone in mice. Role of the microbiome Y Cho, G Abu-Ali, H Tashiro, TA Brown, RS Osgood, DI Kasahara, ... American journal of respiratory cell and molecular biology 60 (2), 198-208, 2019 | 69 | 2019 |
| Differences in adherence and virulence gene expression between two outbreak strains of enterohaemorrhagic Escherichia coli O157 : H7 GS Abu-Ali, LM Ouellette, ST Henderson, TS Whittam, SD Manning Microbiology 156 (2), 408-419, 2010 | 65 | 2010 |
| Structure of the mucosal and stool microbiome in Lynch syndrome Y Yan, DA Drew, A Markowitz, J Lloyd-Price, G Abu-Ali, LH Nguyen, ... Cell host & microbe 27 (4), 585-600. e4, 2020 | 59 | 2020 |
