| GRIDSS: sensitive and specific genomic rearrangement detection using positional de Bruijn graph assembly D Cameron, J Schröder, J Penington, H Do, R Molania, A Dobrovic, ... Genome Research, 2050-2060, 2017 | 402 | 2017 |
| Modelling human blastocysts by reprogramming fibroblasts into iBlastoids X Liu, JP Tan, J Schröder, A Aberkane, JF Ouyang, M Mohenska, SM Lim, ... Nature 591 (7851), 627-632, 2021 | 401 | 2021 |
| UV-associated mutations underlie the etiology of MCV-negative Merkel cell carcinomas SQ Wong, K Waldeck, IA Vergara, J Schröder, J Madore, JS Wilmott, ... Cancer research 75 (24), 5228-5234, 2015 | 379 | 2015 |
| Musket: a multistage k-mer spectrum-based error corrector for Illumina sequence data Y Liu, J Schröder, B Schmidt Bioinformatics 29 (3), 308-315, 2013 | 361 | 2013 |
| Correcting errors in short reads by multiple alignments L Salmela, J Schröder bioinformatics 27 (11), 1455-1461, 2011 | 223 | 2011 |
| Reprogramming roadmap reveals route to human induced trophoblast stem cells X Liu, JF Ouyang, FJ Rossello, JP Tan, KC Davidson, DS Valdes, ... Nature 586 (7827), 101-107, 2020 | 219 | 2020 |
| SHREC: a short-read error correction method J Schröder, H Schröder, SJ Puglisi, R Sinha, B Schmidt bioinformatics 25 (17), 2157-2163, 2009 | 217 | 2009 |
| The architecture and evolution of cancer neochromosomes DW Garsed, OJ Marshall, VDA Corbin, A Hsu, L Di Stefano, J Schröder, ... Cancer cell 26 (5), 653-667, 2014 | 213 | 2014 |
| Nicotinamide riboside attenuates age-associated metabolic and functional changes in hematopoietic stem cells X Sun, B Cao, M Naval-Sanchez, T Pham, YBY Sun, B Williams, ... Nature communications 12 (1), 2665, 2021 | 105 | 2021 |
| Socrates: identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads J Schröder, A Hsu, SE Boyle, G Macintyre, M Cmero, RW Tothill, ... Bioinformatics 30 (8), 1064-1072, 2014 | 105 | 2014 |
| Single-cell protein expression profiling resolves circulating and resident memory T cell diversity across tissues and infection contexts M Evrard, E Becht, R Fonseca, A Obers, SL Park, N Ghabdan-Zanluqui, ... Immunity 56 (7), 1664-1680. e9, 2023 | 66 | 2023 |
| Dietary fiber and microbiota metabolite receptors enhance cognition and alleviate disease in the 5xFAD mouse model of Alzheimer’s disease Y Zhou, L Xie, J Schröder, IS Schuster, M Nakai, G Sun, YBY Sun, ... Journal of Neuroscience 43 (37), 6460-6475, 2023 | 65 | 2023 |
| CD4+ T cell immunity against cutaneous melanoma encompasses multifaceted MHC II–dependent responses EG Bawden, T Wagner, J Schröder, M Effern, D Hinze, L Newland, ... Science immunology 9 (91), eadi9517, 2024 | 64 | 2024 |
| Divergent molecular networks program functionally distinct CD8+ skin-resident memory T cells SL Park, SN Christo, AC Wells, LC Gandolfo, A Zaid, YO Alexandre, ... Science 382 (6674), 1073-1079, 2023 | 63 | 2023 |
| Multi-level remodelling of chromatin underlying activation of human T cells NG Bediaga, HD Coughlan, TM Johanson, AL Garnham, G Naselli, ... Scientific reports 11 (1), 528, 2021 | 61 | 2021 |
| Genomic characterisation of Eμ-Myc mouse lymphomas identifies Bcor as a Myc co-operative tumour-suppressor gene M Lefebure, R Tothill, E Kruse, E Hawkins, J Shortt, G Matthews, ... Nature Communications, 2017 | 58 | 2017 |
| Inferring structural variant cancer cell fraction M Cmero, K Yuan, CS Ong, J Schröder, NM Corcoran, T Papenfuss, ... Nature communications 11 (1), 730, 2020 | 53 | 2020 |
| The Scalloped and Nerfin-1 transcription factors cooperate to maintain neuronal cell fate JHA Vissers, F Froldi, J Schröder, AT Papenfuss, LY Cheng, KF Harvey Cell reports 25 (6), 1561-1576. e7, 2018 | 48 | 2018 |
| An orthotopic mouse model of gastric cancer invasion and metastasis R Busuttil, D Liu, N Costanzo, J Schröder, C Mitchell, A Boussioutas Scientific Reports 8 (825), 2018 | 48 | 2018 |
| HECTOR: a parallel multistage homopolymer spectrum based error corrector for 454 sequencing data A Wirawan, RS Harris, Y Liu, B Schmidt, J Schröder BMC bioinformatics 15 (1), 131, 2014 | 47 | 2014 |
Professor Tony PapenfussDeputy Director, Walter and Eliza Hall Institute of Medical ResearchVerified email at wehi.edu.au
