| Pfam: the protein families database RD Finn, A Bateman, J Clements, P Coggill, RY Eberhardt, SR Eddy, ... Nucleic acids research 42 (D1), D222-D230, 2014 | 14923* | 2014 |
| Genome sequence, comparative analysis and haplotype structure of the domestic dog K Lindblad-Toh, CM Wade, TS Mikkelsen, EK Karlsson, DB Jaffe, ... Nature 438 (7069), 803-819, 2005 | 3314 | 2005 |
| Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-18, 2007 | 2393 | 2007 |
| UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy T Smith, A Heger, I Sudbery Genome research 27 (3), 491-499, 2017 | 2206 | 2017 |
| Sequencing depth and coverage: key considerations in genomic analyses D Sims, I Sudbery, NE Ilott, A Heger, CP Ponting Nature Reviews Genetics 15 (2), 121-132, 2014 | 1961 | 2014 |
| Mouse genomic variation and its effect on phenotypes and gene regulation TM Keane, L Goodstadt, P Danecek, MA White, K Wong, B Yalcin, ... Nature 477 (7364), 289-294, 2011 | 1786 | 2011 |
| A ChIP-seq defined genome-wide map of vitamin D receptor binding: associations with disease and evolution SV Ramagopalan, A Heger, AJ Berlanga, NJ Maugeri, MR Lincoln, ... Genome research 20 (10), 1352-1360, 2010 | 1163 | 2010 |
| The genome of a songbird WC Warren, DF Clayton, H Ellegren, AP Arnold, LDW Hillier, A Künstner, ... Nature 464 (7289), 757-762, 2010 | 1008 | 2010 |
| Insights into hominid evolution from the gorilla genome sequence A Scally, JY Dutheil, LDW Hillier, GE Jordan, I Goodhead, J Herrero, ... Nature 483 (7388), 169-175, 2012 | 880 | 2012 |
| Genome analysis of the platypus reveals unique signatures of evolution Nature 453 (7192), 175-183, 2008 | 804 | 2008 |
| Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences TS Mikkelsen, MJ Wakefield, B Aken, CT Amemiya, JL Chang, S Duke, ... Nature 447 (7141), 167-177, 2007 | 796 | 2007 |
| Comparative and demographic analysis of orang-utan genomes DP Locke, LDW Hillier, WC Warren, KC Worley, LV Nazareth, DM Muzny, ... Nature 469 (7331), 529-533, 2011 | 763 | 2011 |
| The genome of the green anole lizard and a comparative analysis with birds and mammals J Alföldi, F Di Palma, M Grabherr, C Williams, L Kong, E Mauceli, ... Nature 477 (7366), 587-591, 2011 | 743 | 2011 |
| KDM2B links the Polycomb Repressive Complex 1 (PRC1) to recognition of CpG islands AM Farcas, NP Blackledge, I Sudbery, HK Long, JF McGouran, NR Rose, ... elife 1, e00205, 2012 | 555 | 2012 |
| Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-antigen expression in thymic epithelia SN Sansom, N Shikama-Dorn, S Zhanybekova, G Nusspaumer, ... Genome research 24 (12), 1918-1931, 2014 | 404 | 2014 |
| Targeting polycomb to pericentric heterochromatin in embryonic stem cells reveals a role for H2AK119u1 in PRC2 recruitment S Cooper, M Dienstbier, R Hassan, L Schermelleh, J Sharif, ... Cell reports 7 (5), 1456-1470, 2014 | 401 | 2014 |
| Rapid automatic detection and alignment of repeats in protein sequences A Heger, L Holm Proteins: Structure, Function, and Bioinformatics 41 (2), 224-237, 2000 | 391 | 2000 |
| Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes NE Ilott, JA Heward, B Roux, E Tsitsiou, PS Fenwick, L Lenzi, I Goodhead, ... Nature communications 5 (1), 3979, 2014 | 350* | 2014 |
| GAT: a simulation framework for testing the association of genomic intervals A Heger, C Webber, M Goodson, CP Ponting, G Lunter Bioinformatics 29 (16), 2046-2048, 2013 | 274 | 2013 |
| Epigenetic conservation at gene regulatory elements revealed by non-methylated DNA profiling in seven vertebrates HK Long, D Sims, A Heger, NP Blackledge, C Kutter, ML Wright, ... elife 2, e00348, 2013 | 256 | 2013 |
Chris PontingChair of Medical Bioinformatics, University of EdinburghVerified email at igmm.ed.ac.uk
