| Genomic classification of cutaneous melanoma R Akbani, KC Akdemir, BA Aksoy, M Albert, A Ally, SB Amin, H Arachchi, ... Cell 161 (7), 1681-1696, 2015 | 3180 | 2015 |
| Exome sequencing identifies recurrent somatic RAC1 mutations in melanoma M Krauthammer, Y Kong, BH Ha, P Evans, A Bacchiocchi, JP McCusker, ... Nature genetics 44 (9), 1006-1014, 2012 | 1437 | 2012 |
| In vivo identification of tumor-suppressive PTEN ceRNAs in an oncogenic BRAF-induced mouse model of melanoma FA Karreth, Y Tay, D Perna, U Ala, SM Tan, AG Rust, G DeNicola, ... Cell 147 (2), 382-395, 2011 | 761 | 2011 |
| GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles C Friedman, P Kra, H Yu, M Krauthammer, A Rzhetsky Bioinformatics 17, S74-S82, 2001 | 727 | 2001 |
| Exome sequencing identifies recurrent mutations in NF1 and RASopathy genes in sun-exposed melanomas M Krauthammer, Y Kong, A Bacchiocchi, P Evans, N Pornputtapong, ... Nature genetics 47 (9), 996-1002, 2015 | 494 | 2015 |
| Term identification in the biomedical literature M Krauthammer, G Nenadic Journal of biomedical informatics 37 (6), 512-526, 2004 | 489 | 2004 |
| Overview of BioCreative II gene normalization AA Morgan, Z Lu, X Wang, AM Cohen, J Fluck, P Ruch, A Divoli, K Fundel, ... Genome biology 9 (Suppl 2), S3, 2008 | 426 | 2008 |
| PLX4032, a selective BRAFV600E kinase inhibitor, activates the ERK pathway and enhances cell migration and proliferation of BRAFWT melanoma cells R Halaban, W Zhang, A Bacchiocchi, E Cheng, F Parisi, S Ariyan, ... Pigment cell & melanoma research 23 (2), 190-200, 2010 | 420 | 2010 |
| GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data A Rzhetsky, I Iossifov, T Koike, M Krauthammer, P Kra, M Morris, H Yu, ... Journal of biomedical informatics 37 (1), 43-53, 2004 | 367 | 2004 |
| Using BLAST for identifying gene and protein names in journal articles M Krauthammer, A Rzhetsky, P Morozov, C Friedman Gene 259 (1-2), 245-252, 2000 | 313 | 2000 |
| Genome-wide screen of promoter methylation identifies novel markers in melanoma Y Koga, M Pelizzola, E Cheng, M Krauthammer, M Sznol, S Ariyan, ... Genome research 19 (8), 1462-1470, 2009 | 238 | 2009 |
| Molecular triangulation: bridging linkage and molecular-network information for identifying candidate genes in Alzheimer's disease M Krauthammer, CA Kaufmann, TC Gilliam, A Rzhetsky Proceedings of the National Academy of Sciences 101 (42), 15148-15153, 2004 | 202 | 2004 |
| Commensal Clostridiales strains mediate effective anti-cancer immune response against solid tumors A Montalban-Arques, E Katkeviciute, P Busenhart, A Bircher, J Wirbel, ... Cell host & microbe 29 (10), 1573-1588. e7, 2021 | 191 | 2021 |
| Progressive transformer-based generation of radiology reports F Nooralahzadeh, NP Gonzalez, T Frauenfelder, K Fujimoto, ... arXiv preprint arXiv:2102.09777, 2021 | 165 | 2021 |
| Interlesional diversity of T cell receptors in melanoma with immune checkpoints enriched in tissue-resident memory T cells CS Boddupalli, N Bar, K Kadaveru, M Krauthammer, N Pornputtapong, ... JCI insight 1 (21), e88955, 2016 | 163 | 2016 |
| Germline MC1R status influences somatic mutation burden in melanoma CD Robles-Espinoza, ND Roberts, S Chen, FP Leacy, LB Alexandrov, ... Nature communications 7 (1), 12064, 2016 | 158 | 2016 |
| MEDME: an experimental and analytical methodology for the estimation of DNA methylation levels based on microarray derived MeDIP-enrichment M Pelizzola, Y Koga, AE Urban, M Krauthammer, S Weissman, R Halaban, ... Genome research 18 (10), 1652-1659, 2008 | 146 | 2008 |
| The state of melanoma: challenges and opportunities G Merlino, M Herlyn, DE Fisher, BC Bastian, KT Flaherty, MA Davies, ... Pigment cell & melanoma research 29 (4), 404-416, 2016 | 144 | 2016 |
| Yale Image Finder (YIF): a new search engine for retrieving biomedical images S Xu, J McCusker, M Krauthammer Bioinformatics 24 (17), 1968-1970, 2008 | 139 | 2008 |
| Predicting prime editing efficiency and product purity by deep learning N Mathis, A Allam, L Kissling, KF Marquart, L Schmidheini, C Solari, ... Nature biotechnology 41 (8), 1151-1159, 2023 | 134 | 2023 |
