| AMBER 10. DA Case (No Title), 2008 | 12530* | 2008 |
| Amber 2023 DA Case, HM Aktulga, K Belfon, IY Ben-Shalom, JT Berryman, SR Brozell, ... University of California, San Francisco, 2023 | 6544 | 2023 |
| Routine microsecond molecular dynamics simulations with AMBER on GPUs. 2. Explicit solvent particle mesh Ewald R Salomon-Ferrer, AW Gotz, D Poole, S Le Grand, RC Walker Journal of chemical theory and computation 9 (9), 3878-3888, 2013 | 3700 | 2013 |
| An overview of the Amber biomolecular simulation package R Salomon‐Ferrer, DA Case, RC Walker Wiley Interdisciplinary Reviews: Computational Molecular Science 3 (2), 198-210, 2013 | 3041 | 2013 |
| Routine microsecond molecular dynamics simulations with AMBER on GPUs. 1. Generalized born AW Gotz, MJ Williamson, D Xu, D Poole, S Le Grand, RC Walker Journal of chemical theory and computation 8 (5), 1542-1555, 2012 | 2286 | 2012 |
| Long-time-step molecular dynamics through hydrogen mass repartitioning CW Hopkins, S Le Grand, RC Walker, AE Roitberg Journal of chemical theory and computation 11 (4), 1864-1874, 2015 | 1436 | 2015 |
| Lipid14: the amber lipid force field CJ Dickson, BD Madej, ÅA Skjevik, RM Betz, K Teigen, IR Gould, ... Journal of chemical theory and computation 10 (2), 865-879, 2014 | 1410 | 2014 |
| SPFP: Speed without compromise—A mixed precision model for GPU accelerated molecular dynamics simulations S Le Grand, AW Götz, RC Walker Computer Physics Communications 184 (2), 374-380, 2013 | 1240 | 2013 |
| Routine access to millisecond time scale events with accelerated molecular dynamics LCT Pierce, R Salomon-Ferrer, C Augusto F. de Oliveira, JA McCammon, ... Journal of chemical theory and computation 8 (9), 2997-3002, 2012 | 583 | 2012 |
| AMBER 14; University of California: San Francisco, 2014 DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ... There is no corresponding record for this reference, 1-826, 2014 | 541* | 2014 |
| The implementation of a fast and accurate QM/MM potential method in Amber RC Walker, MF Crowley, DA Case Journal of computational chemistry 29 (7), 1019-1031, 2008 | 500 | 2008 |
| GPU-accelerated molecular dynamics and free energy methods in Amber18: performance enhancements and new features TS Lee, DS Cerutti, D Mermelstein, C Lin, S LeGrand, TJ Giese, ... Journal of chemical information and modeling 58 (10), 2043-2050, 2018 | 499 | 2018 |
| Improved reweighting of accelerated molecular dynamics simulations for free energy calculation Y Miao, W Sinko, L Pierce, D Bucher, RC Walker, JA McCammon Journal of chemical theory and computation 10 (7), 2677-2689, 2014 | 466 | 2014 |
| AMBER 20 DA Case, K Belfon, IY Ben-Shalom, SR Brozell, DS Cerutti, ... University of California: San Francisco, CA, USA, 2020 | 446 | 2020 |
| AMBER 2018, University of California, San Francisco DA Case, IY Ben-Shalom, SR Brozell, DS Cerutti, TE Cheatham III, ... Ta [Google Scholar], 2018 | 385 | 2018 |
| Lipid21: complex lipid membrane simulations with AMBER CJ Dickson, RC Walker, IR Gould Journal of chemical theory and computation 18 (3), 1726-1736, 2022 | 323 | 2022 |
| Implementation of the SCC-DFTB method for hybrid QM/MM simulations within the Amber molecular dynamics package GM Seabra, RC Walker, M Elstner, DA Case, AE Roitberg The Journal of Physical Chemistry A 111 (26), 5655-5664, 2007 | 296 | 2007 |
| GAFFlipid: a General Amber Force Field for the accurate molecular dynamics simulation of phospholipid CJ Dickson, L Rosso, RM Betz, RC Walker, IR Gould Soft Matter 8 (37), 9617-9627, 2012 | 284 | 2012 |
| The FF14SB force field DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ... Amber 14, 29-31, 2014 | 266 | 2014 |
| Speed of conformational change: comparing explicit and implicit solvent molecular dynamics simulations R Anandakrishnan, A Drozdetski, RC Walker, AV Onufriev Biophysical journal 108 (5), 1153-1164, 2015 | 252 | 2015 |
