| Estimating clinical severity of COVID-19 from the transmission dynamics in Wuhan, China JT Wu, K Leung, M Bushman, N Kishore, R Niehus, PM de Salazar, ... Nature medicine 26 (4), 506-510, 2020 | 1724 | 2020 |
| Practical considerations for measuring the effective reproductive number, Rt KM Gostic, L McGough, EB Baskerville, S Abbott, K Joshi, C Tedijanto, ... PLoS computational biology 16 (12), e1008409, 2020 | 649 | 2020 |
| The gut microbiota is associated with immune cell dynamics in humans J Schluter, JU Peled, BP Taylor, KA Markey, M Smith, Y Taur, R Niehus, ... Nature 588 (7837), 303-307, 2020 | 568 | 2020 |
| Evolutionary limits to cooperation in microbial communities NM Oliveira, R Niehus, KR Foster Proceedings of the National Academy of Sciences 111 (50), 17941-17946, 2014 | 259 | 2014 |
| The evolution of siderophore production as a competitive trait R Niehus, A Picot, NM Oliveira, S Mitri, KR Foster Evolution 71 (6), 1443-1455, 2017 | 206 | 2017 |
| Migration and horizontal gene transfer divide microbial genomes into multiple niches R Niehus, S Mitri, AG Fletcher, KR Foster Nature communications 6 (1), 8924, 2015 | 161 | 2015 |
| How to detect and reduce potential sources of biases in studies of SARS-CoV-2 and COVID-19 EK Accorsi, X Qiu, E Rumpler, L Kennedy-Shaffer, R Kahn, K Joshi, ... European journal of epidemiology 36 (2), 179-196, 2021 | 145 | 2021 |
| The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples HS Gweon, LP Shaw, J Swann, N De Maio, M AbuOun, R Niehus, ... Environmental Microbiome 14 (1), 1-15, 2019 | 130 | 2019 |
| Quantifying bias of COVID-19 prevalence and severity estimates in Wuhan, China that depend on reported cases in international travelers R Niehus, PM De Salazar, AR Taylor, M Lipsitch Medrxiv, 2020 | 119 | 2020 |
| Predictive performance of multi-model ensemble forecasts of COVID-19 across European nations K Sherratt, H Gruson, H Johnson, R Niehus, B Prasse, F Sandmann, ... Elife 12, e81916, 2023 | 113 | 2023 |
| Using predicted imports of 2019-nCoV cases to determine locations that may not be identifying all imported cases PM De Salazar, R Niehus, A Taylor, C Buckee, M Lipsitch MedRxiv, 2020 | 93 | 2020 |
| Using observational data to quantify bias of traveller-derived COVID-19 prevalence estimates in Wuhan, China R Niehus, PM De Salazar, AR Taylor, M Lipsitch The Lancet Infectious Diseases 20 (7), 803-808, 2020 | 89 | 2020 |
| The evolution of strategy in bacterial warfare via the regulation of bacteriocins and antibiotics R Niehus, NM Oliveira, A Li, AG Fletcher, KR Foster Elife 10, e69756, 2021 | 75 | 2021 |
| Collaborative hubs: making the most of predictive epidemic modeling NG Reich, J Lessler, S Funk, C Viboud, A Vespignani, RJ Tibshirani, ... American Journal of Public Health 112 (6), 839-842, 2022 | 70 | 2022 |
| Identifying locations with possible undetected imported severe acute respiratory syndrome coronavirus 2 cases by using importation predictions PM De Salazar, R Niehus, A Taylor, COF Buckee, M Lipsitch Emerging infectious diseases 26 (7), 1465, 2020 | 63 | 2020 |
| Estimating internationally imported cases during the early COVID-19 pandemic TF Menkir, T Chin, JA Hay, ED Surface, PM De Salazar, CO Buckee, ... Nature communications 12 (1), 311, 2021 | 56 | 2021 |
| Implications of reducing antibiotic treatment duration for antimicrobial resistance in hospital settings: a modelling study and meta-analysis Y Mo, M Oonsivilai, C Lim, R Niehus, BS Cooper PLoS medicine 20 (6), e1004013, 2023 | 51 | 2023 |
| The influence of COVID-19 risk perception and vaccination status on the number of social contacts across Europe: insights from the CoMix study J Wambua, N Loedy, CI Jarvis, KLM Wong, C Faes, R Grah, B Prasse, ... BMC Public Health 23 (1), 1350, 2023 | 50 | 2023 |
| Quantifying antibiotic impact on within-patient dynamics of extended-spectrum beta-lactamase resistance R Niehus, E van Kleef, Y Mo, A Turlej-Rogacka, C Lammens, Y Carmeli, ... Elife 9, e49206, 2020 | 31 | 2020 |
| Population-level faecal metagenomic profiling as a tool to predict antimicrobial resistance in Enterobacterales isolates causing invasive infections: An exploratory study … OT Auguet, R Niehus, HS Gweon, JA Berkley, J Waichungo, T Njim, ... EClinicalMedicine 36, 2021 | 24 | 2021 |
Kevin FosterFRS, Chair of Microbiology, University of OxfordVerified email at path.ox.ac.uk
