| Linking long-term dietary patterns with gut microbial enterotypes GD Wu, J Chen, C Hoffmann, K Bittinger, YY Chen, SA Keilbaugh, ... Science 334 (6052), 105-108, 2011 | 8069 | 2011 |
| High-fat diet determines the composition of the murine gut microbiome independently of obesity MA Hildebrandt, C Hoffmann, SA Sherrill–Mix, SA Keilbaugh, M Hamady, ... Gastroenterology 137 (5), 1716-1724. e2, 2009 | 1942 | 2009 |
| Associating microbiome composition with environmental covariates using generalized UniFrac distances J Chen, K Bittinger, ES Charlson, C Hoffmann, J Lewis, GD Wu, ... Bioinformatics 28 (16), 2106-2113, 2012 | 1149 | 2012 |
| Archaea and Fungi of the Human Gut Microbiome: Correlations with Diet and Bacterial Residents C Hoffmann, S Dollive, S Grunberg, J Chen, H Li, GD Wu, JD Lewis, ... PLOS ONE 8 (6), e66019, 2013 | 1021 | 2013 |
| Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn’s Disease JD Lewis, EZ Chen, RN Baldassano, AR Otley, AM Griffiths, D Lee, ... Cell host & microbe 18 (4), 489-500, 2015 | 990 | 2015 |
| The human gut microbiota: Metabolism and perspective in obesity AC Gomes, C Hoffmann, JF Mota Gut microbes 9 (4), 308-325, 2018 | 899 | 2018 |
| A role for LEDGF/p75 in targeting HIV DNA integration A Ciuffi, M Llano, E Poeschla, C Hoffmann, J Leipzig, P Shinn, JR Ecker, ... Nature medicine 11 (12), 1287-1289, 2005 | 893 | 2005 |
| A role for LEDGF/p75 in targeting HIV DNA integration M Llano, A Ciuffi, E Poeschla, C Hoffmann Nature medicine, 1287-1289, 2005 | 893* | 2005 |
| Genome-wide analysis of retroviral DNA integration F Bushman, M Lewinski, A Ciuffi, S Barr, J Leipzig, S Hannenhalli, ... Nature Reviews Microbiology 3 (11), 848-858, 2005 | 562 | 2005 |
| The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis P McKenna, C Hoffmann, N Minkah, PP Aye, A Lackner, Z Liu, ... PLoS pathogens 4 (2), e20, 2008 | 546 | 2008 |
| Metagenomic analyses reveal antibiotic-induced temporal and spatial changes in intestinal microbiota with associated alterations in immune cell homeostasis DA Hill, C Hoffmann, MC Abt, Y Du, D Kobuley, TJ Kirn, FD Bushman, ... Mucosal immunology 3 (2), 148-158, 2010 | 512 | 2010 |
| Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags GD Wu, JD Lewis, C Hoffmann, YY Chen, R Knight, K Bittinger, J Hwang, ... BMC microbiology 10 (1), 206, 2010 | 492 | 2010 |
| Genome-wide analysis of chromosomal features repressing human immunodeficiency virus transcription MK Lewinski, D Bisgrove, P Shinn, H Chen, C Hoffmann, S Hannenhalli, ... Journal of virology 79 (11), 6610-6619, 2005 | 360 | 2005 |
| Fungal Signature in the Gut Microbiota of Pediatric Patients With Inflammatory Bowel Disease C Chehoud, LG Albenberg, C Judge, C Hoffmann, S Grunberg, K Bittinger, ... Inflammatory bowel diseases 21 (8), 1948-1956, 2015 | 322 | 2015 |
| DNA bar coding and pyrosequencing to identify rare HIV drug resistance mutations C Hoffmann, N Minkah, J Leipzig, G Wang, MQ Arens, P Tebas, ... Nucleic acids research 35 (13), e91, 2007 | 296 | 2007 |
| Fungi of the murine gut: episodic variation and proliferation during antibiotic treatment S Dollive, YY Chen, S Grunberg, K Bittinger, C Hoffmann, L Vandivier, ... PloS one 8 (8), e71806, 2013 | 269 | 2013 |
| Cxcr2 and Cxcl5 regulate the IL-17/G-CSF axis and neutrophil homeostasis in mice J Mei, Y Liu, N Dai, C Hoffmann, KM Hudock, P Zhang, SH Guttentag, ... The Journal of clinical investigation 122 (3), 974-986, 2012 | 245 | 2012 |
| A role for bacterial urease in gut dysbiosis and Crohn’s disease J Ni, TCD Shen, EZ Chen, K Bittinger, A Bailey, M Roggiani, A Sirota-Madi, ... Science translational medicine 9 (416), eaah6888, 2017 | 230 | 2017 |
| A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples S Dollive, GL Peterfreund, S Sherrill-Mix, K Bittinger, R Sinha, C Hoffmann, ... Genome biology 13 (7), R60, 2012 | 175 | 2012 |
| Inflammation-associated microbiota in pediatric eosinophilic esophagitis AJ Benitez, C Hoffmann, AB Muir, KK Dods, JM Spergel, FD Bushman, ... Microbiome 3 (1), 23, 2015 | 173 | 2015 |
