| Functional annotation of a full-length mouse cDNA collection General organizer Hayashizaki Y. yosihide@ gsc. riken. go. uk 1 2 44 b Nature 409 (6821), 685-690, 2001 | 912 | 2001 |
| Phylogenetic shadowing of primate sequences to find functional regions of the human genome D Boffelli, J McAuliffe, D Ovcharenko, KD Lewis, I Ovcharenko, L Pachter, ... Science 299 (5611), 1391-1394, 2003 | 693 | 2003 |
| Symbiosis insights through metagenomic analysis of a microbial consortium T Woyke, H Teeling, NN Ivanova, M Huntemann, M Richter, FO Gloeckner, ... Nature 443 (7114), 950-955, 2006 | 571 | 2006 |
| Selection-free genome editing of the sickle mutation in human adult hematopoietic stem/progenitor cells MA DeWitt, W Magis, NL Bray, T Wang, JR Berman, F Urbinati, SJ Heo, ... Science translational medicine 8 (360), 360ra134-360ra134, 2016 | 567 | 2016 |
| Comparative genomics at the vertebrate extremes D Boffelli, MA Nobrega, EM Rubin Nature Reviews Genetics 5 (6), 456-465, 2004 | 370 | 2004 |
| Identification of a receptor mediating absorption of dietary cholesterol in the intestine H Hauser, JH Dyer, A Nandy, MA Vega, M Werder, E Bieliauskaite, ... Biochemistry 37 (51), 17843-17850, 1998 | 323 | 1998 |
| Identification and correction of systematic error in high-throughput sequence data F Meacham, D Boffelli, J Dhahbi, DIK Martin, M Singer, L Pachter BMC bioinformatics 12 (1), 451, 2011 | 314 | 2011 |
| 5′ tRNA halves are present as abundant complexes in serum, concentrated in blood cells, and modulated by aging and calorie restriction JM Dhahbi, SR Spindler, H Atamna, A Yamakawa, D Boffelli, P Mote, ... BMC genomics 14 (1), 298, 2013 | 275 | 2013 |
| Deep sequencing of serum small RNAs identifies patterns of 5′ tRNA half and YRNA fragment expression associated with breast cancer JM Dhahbi, SR Spindler, H Atamna, D Boffelli, DIK Martin Biomarkers in cancer 6, BIC. S20764, 2014 | 216 | 2014 |
| Genome methylation in D. melanogaster is found at specific short motifs and is independent of DNMT2 activity S Takayama, J Dhahbi, A Roberts, G Mao, SJ Heo, L Pachter, DIK Martin, ... Genome research 24 (5), 821-830, 2014 | 158 | 2014 |
| Apolipoprotein (a) gene enhancer resides within a LINE element Z Yang, D Boffelli, N Boonmark, K Schwartz, R Lawn Journal of Biological Chemistry 273 (2), 891-897, 1998 | 155 | 1998 |
| 5′-YRNA fragments derived by processing of transcripts from specific YRNA genes and pseudogenes are abundant in human serum and plasma JM Dhahbi, SR Spindler, H Atamna, D Boffelli, P Mote, DIK Martin Physiological genomics 45 (21), 990-998, 2013 | 132 | 2013 |
| Deep sequencing reveals novel microRNAs and regulation of microRNA expression during cell senescence JM Dhahbi, H Atamna, D Boffelli, W Magis, SR Spindler, DIK Martin PloS one 6 (5), e20509, 2011 | 102 | 2011 |
| Activation-induced cytidine deaminase (AID) is necessary for the epithelial–mesenchymal transition in mammary epithelial cells DP Muñoz, EL Lee, S Takayama, JP Coppé, SJ Heo, D Boffelli, ... Proceedings of the National Academy of Sciences 110 (32), E2977-E2986, 2013 | 99 | 2013 |
| Deep sequencing identifies circulating mouse miRNAs that are functionally implicated in manifestations of aging and responsive to calorie restriction JM Dhahbi, SR Spindler, H Atamna, A Yamakawa, N Guerrero, D Boffelli, ... Aging (Albany NY) 5 (2), 130, 2013 | 83 | 2013 |
| eShadow: a tool for comparing closely related sequences I Ovcharenko, D Boffelli, GG Loots Genome Research 14 (6), 1191-1198, 2004 | 79 | 2004 |
| Graded BMP signaling within intestinal crypt architecture directs self-organization of the Wnt-secreting stem cell niche J Kraiczy, N McCarthy, E Malagola, G Tie, S Madha, D Boffelli, ... Cell Stem Cell 30 (4), 433-449. e8, 2023 | 78 | 2023 |
| Patterning and folding of intestinal villi by active mesenchymal dewetting TR Huycke, TJ Häkkinen, H Miyazaki, V Srivastava, E Barruet, ... Cell 187 (12), 3072-3089. e20, 2024 | 69 | 2024 |
| Estrogen modulation of apolipoprotein (a) expression: identification of a regulatory element D Boffelli, DA Zajchowski, Z Yang, RM Lawn Journal of Biological Chemistry 274 (22), 15569-15574, 1999 | 69 | 1999 |
| Towards a reference genome that captures global genetic diversity KHY Wong, W Ma, CY Wei, EC Yeh, WJ Lin, EHF Wang, JP Su, FJ Hsieh, ... Nature communications 11 (1), 5482, 2020 | 67 | 2020 |
Joseph M. DhahbiProfessor of Biochemistry, Genomics and Medical Education, California University of Science andVerified email at calmedu.org
