| The collagen receptor subfamily of the integrins DJ White, S Puranen, MS Johnson, J Heino The international journal of biochemistry & cell biology 36 (8), 1405-1410, 2004 | 254 | 2004 |
| α11β1 integrin recognizes the GFOGER sequence in interstitial collagens WM Zhang, J Käpylä, JS Puranen, CG Knight, CF Tiger, ... Journal of Biological Chemistry 278 (9), 7270-7277, 2003 | 239 | 2003 |
| ShaEP: molecular overlay based on shape and electrostatic potential MJ Vainio, JS Puranen, MS Johnson Journal of chemical information and modeling 49 (2), 492-502, 2009 | 238 | 2009 |
| Plasmids shaped the recent emergence of the major nosocomial pathogen Enterococcus faecium S Arredondo-Alonso, J Top, A McNally, S Puranen, M Pesonen, J Pensar, ... MBio 11 (1), 10.1128/mbio. 03284-19, 2020 | 160* | 2020 |
| Accurate conformation‐dependent molecular electrostatic potentials for high‐throughput in silico drug discovery JS Puranen, MJ Vainio, MS Johnson Journal of computational chemistry 31 (8), 1722-1732, 2010 | 133 | 2010 |
| Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis MJ Skwark, NJ Croucher, S Puranen, C Chewapreecha, M Pesonen, ... PLoS genetics 13 (2), e1006508, 2017 | 117 | 2017 |
| Molecular mechanism of α2β1 integrin interaction with human echovirus 1 J Jokinen, DJ White, M Salmela, M Huhtala, J Käpylä, K Sipilä, ... The EMBO journal 29 (1), 196, 2009 | 81 | 2009 |
| Emergence of ceftazidime-avibactam-resistant Klebsiella pneumoniae during treatment, Finland, December 2018 K Räisänen, I Koivula, H Ilmavirta, S Puranen, T Kallonen, O Lyytikäinen, ... Eurosurveillance 24 (19), 1900256, 2019 | 70 | 2019 |
| Jararhagin-derived RKKH peptides induce structural changes in α1I domain of human integrin α1β1 Y Nymalm, JS Puranen, TKM Nyholm, J Käpylä, H Kidron, ... Journal of Biological Chemistry 279 (9), 7962-7970, 2004 | 59 | 2004 |
| Genome-wide epistasis and co-selection study using mutual information J Pensar, S Puranen, B Arnold, N MacAlasdair, J Kuronen, G Tonkin-Hill, ... Nucleic acids research 47 (18), e112-e112, 2019 | 55 | 2019 |
| Effects of conformational activation of integrin α1I and α2I domains on selective recognition of laminin and collagen subtypes M Tulla, M Lahti, JS Puranen, AM Brandt, J Käpylä, A Domogatskaya, ... Experimental cell research 314 (8), 1734-1743, 2008 | 48 | 2008 |
| Two synergistic activation mechanisms of α2β1 integrin-mediated collagen binding WL Connors, J Jokinen, DJ White, JS Puranen, P Kankaanpaöaö, P Upla, ... Journal of Biological Chemistry 282 (19), 14675-14683, 2007 | 42 | 2007 |
| SuperDCA for genome-wide epistasis analysis S Puranen, M Pesonen, J Pensar, YY Xu, JA Lees, SD Bentley, ... Microbial Genomics 4 (6), doi: 10.1099/mgen.0.000184, 2018 | 33 | 2018 |
| Genomic rearrangements uncovered by genome-wide co-evolution analysis of a major nosocomial pathogen, Enterococcus faecium J Top, S Arredondo-Alonso, AC Schürch, S Puranen, M Pesonen, ... Microbial genomics 6 (12), e000488, 2020 | 16 | 2020 |
| K-Pax2: Bayesian identification of cluster-defining amino acid positions in large sequence datasets A Pessia, Y Grad, S Cobey, JS Puranen, J Corander Microbial genomics 1 (1), e000025, 2015 | 15 | 2015 |
| Molecular docking guided comparative GFA, G/PLS, SVM and ANN models of structurally diverse dual binding site acetylcholinesterase inhibitors S Gupta, A Fallarero, MJ Vainio, P Saravanan, J Santeri Puranen, ... Molecular informatics 30 (8), 689-706, 2011 | 13 | 2011 |
| Plasmids shaped the recent emergence of the major nosocomial pathogen Enterococcus faecium. mBio 11 S Arredondo-Alonso, J Top, A McNally, S Puranen, M Pesonen, J Pensar, ... | 11 | 2020 |
| Inverse finite-size scaling for high-dimensional significance analysis Y Xu, S Puranen, J Corander, Y Kabashima Physical Review E 97 (6), 062112, 2018 | 11 | 2018 |
| Epistasis, core-genome disharmony, and adaptation in recombining bacteria AJ Taylor, K Yahara, B Pascoe, S Ko, L Mageiros, E Mourkas, JK Calland, ... Mbio 15 (6), e00581-24, 2024 | 7 | 2024 |
| High-dimensional structure learning of binary pairwise Markov networks: a comparative numerical study J Pensar, Y Xu, S Puranen, M Pesonen, Y Kabashima, J Corander Computational Statistics & Data Analysis 141, 62-76, 2020 | 6 | 2020 |
Johan PensarAssociate Professor, Statistics and Data Science, University of OsloVerified email at math.uio.no
