| Polycomb preferentially targets stalled promoters of coding and non-coding transcripts D Enderle, C Beisel, MB Stadler, M Gerstung, A Prashanth, R Paro Genome Research 21 (2), 216-226, 2011 | 195 | 2011 |
| Web-based drug repurposing tools: a survey PA E. Sam Briefings in Bioinformatics, 2017 | 72 | 2017 |
| Combining Microarray-based Genomic Selection (MGS) with the Illumina Genome Analyzer Platform to Sequence Diploid Target Regions DT Okou, AE Locke, KM Steinberg, K Hagen, P Athri, AC Shetty, V Patel, ... Annals of Human Genetics 73 (5), 502-513, 2009 | 68 | 2009 |
| Molecular Dynamics of Water-Mediated Interactions of a Linear Benzimidazole−Biphenyl Diamidine with the DNA Minor Groove P Athri, WD Wilson Journal of American Chemical Society 131 (22), 76, 2009 | 55 | 2009 |
| SeqAnt: A web service to rapidly identify and annotate DNA sequence variations AC Shetty, P Athri, K Mondal, VL Horner, KM Steinberg, V Patel, ... BMC Bioinformatics 11 (471), 2010 | 50 | 2010 |
| 3D QSAR on a library of heterocyclic diamidine derivatives with antiparasitic activity P Athri, T Wenzler, P Ruiz, R Brun, DW Boykin, R Tidwell, WD Wilson Bioorganic & Medicinal Chemistry 14 (9), 3144-3152, 2006 | 47 | 2006 |
| Exploring the functional impact of alternative splicing on human protein isoforms using available annotation sources D Sulakhe, M D’Souza, S Wang, S Balasubramanian, P Athri, B Xie, ... Briefings in bioinformatics 20 (5), 1754-1768, 2019 | 39 | 2019 |
| Pushing the Frontiers of First-Principles Based Computer Simulations of Chemical and Biological Systems E Brunk, N Ashari, P Athri, P Campomanes, FF de Carvalho, ... Chimia 65 (9), 667-671, 2011 | 29 | 2011 |
| Predicting adverse drug reactions of two‐drug combinations using structural and transcriptomic drug representations to train an artificial neural network S Shankar, I Bhandari, DT Okou, G Srinivasa, P Athri Chemical biology & drug design 97 (3), 665-673, 2021 | 28 | 2021 |
| Review of electrostatic force calculation methods and their acceleration in molecular dynamics packages using graphics processors A George, S Mondal, M Purnaprajna, P Athri ACS omega 7 (37), 32877-32896, 2022 | 24 | 2022 |
| Assessing the performance of computational methods for the prediction of the ground state structure of a cyclic decapeptide M Doemer, M Guglielmi, P Athri, NS Nagornova, TR Rizzo, OV Boyarkin, ... International Journal of Quantum Chemistry 113 (6), 808-814, 2012 | 20 | 2012 |
| Pharmacophore model for pentamidine analogs active against Plasmodium falciparum P Athri, T Wenzler, R Tidwell, SM Bakunova, DW Wilson European Journal of Medicinal Chemistry 45 (12), 6147–6151, 2010 | 20 | 2010 |
| Predicting clinical trial outcomes using drug bioactivities through graph database integration and machine learning V Murali, YP Muralidhar, C Königs, M Nair, S Madhu, P Nedungadi, ... Chemical Biology & Drug Design 100 (2), 169-184, 2022 | 19 | 2022 |
| Chembl bot-a chat bot for chembl database V Murali, RJ Sarma, PA Sukanya, P Athri 2018 Fourteenth International Conference on Information Processing (ICINPRO …, 2018 | 11 | 2018 |
| Analysis of RNA-Seq data using self-supervised learning for vital status prediction of colorectal cancer patients G Padegal, MK Rao, OA Boggaram Ravishankar, S Acharya, P Athri, ... BMC bioinformatics 24 (1), 241, 2023 | 8 | 2023 |
| Genetic‐Algorithm‐Based Optimization of a Peptidic Scaffold for Sequestration and Hydration of CO2 E Brunk, MAS Perez, P Athri, U Rothlisberger ChemPhysChem 17 (23), 3831-3835, 2016 | 8 | 2016 |
| CompoundDB4j: Integrated drug resource of heterogeneous chemical databases V Murali, C Königs, S Deekshitula, S Nukala, MD Santhi, P Athri Molecular informatics 39 (9), 2000013, 2020 | 6 | 2020 |
| A machine learning understanding of sepsis M Shetty, SM Alex, M Moni, F Edathadathil, P Prasanna, V Menon, ... 2021 43rd Annual International Conference of the IEEE Engineering in …, 2021 | 4 | 2021 |
| Computational prediction of potential vaccine candidates from tRNA encoded peptides (tREP) using a bioinformatic workflow and molecular dynamics validations PM Shanthappa, N Verma, A George, PK Dhar, P Athri IEEE/ACM Transactions on Computational Biology and Bioinformatics 21 (3 …, 2024 | 3 | 2024 |
| Laplacian score and genetic algorithm based automatic feature selection for Markov State Models in adaptive sampling based molecular dynamics A George, M Purnaprajna, P Athri PeerJ Physical Chemistry 2, e9, 2020 | 2 | 2020 |
W. David WilsonRegents’ ProfessorVerified email at gsu.edu
