| Control of DNA replication timing in the 3D genome C Marchal, J Sima, DM Gilbert Nature Reviews Molecular Cell Biology 20 (12), 721-737, 2019 | 322 | 2019 |
| Genome-wide analysis of replication timing by next-generation sequencing with E/L Repli-seq C Marchal, T Sasaki, D Vera, K Wilson, J Sima, JC Rivera-Mulia, ... Nature protocols 13 (5), 819-839, 2018 | 201 | 2018 |
| Genome-wide mapping of human DNA replication by optical replication mapping supports a stochastic model of eukaryotic replication W Wang, KN Klein, K Proesmans, H Yang, C Marchal, X Zhu, T Borrman, ... Molecular cell 81 (14), 2975-2988. e6, 2021 | 118 | 2021 |
| Emerging concept in DNA methylation: role of transcription factors in shaping DNA methylation patterns C Marchal, B Miotto Journal of cellular physiology 230 (4), 743-751, 2015 | 81 | 2015 |
| Human T-cell leukemia virus type-1-encoded protein HBZ represses p53 function by inhibiting the acetyltransferase activity of p300/CBP and HBO1 DG Wright, C Marchal, K Hoang, JA Ankney, ST Nguyen, AW Rushing, ... Oncotarget 7 (2), 1687, 2015 | 55 | 2015 |
| High-resolution genome topology of human retina uncovers super enhancer-promoter interactions at tissue-specific and multifactorial disease loci C Marchal, N Singh, Z Batz, J Advani, C Jaeger, X Corso-Díaz, A Swaroop Nature communications 13 (1), 5827, 2022 | 45 | 2022 |
| Rapid irreversible transcriptional reprogramming in human stem cells accompanied by discordance between replication timing and chromatin compartment V Dileep, KA Wilson, C Marchal, X Lyu, PA Zhao, B Li, A Poulet, ... Stem cell reports 13 (1), 193-206, 2019 | 34 | 2019 |
| Stabilization of the methyl-CpG binding protein ZBTB38 by the deubiquitinase USP9X limits the occurrence and toxicity of oxidative stress in human cells B Miotto, C Marchal, G Adelmant, N Guinot, P Xie, JA Marto, L Zhang, ... Nucleic acids research 46 (9), 4392-4404, 2018 | 28 | 2018 |
| HiCRes: a computational method to estimate and predict the genomic resolution of Hi-C libraries C Marchal, N Singh, X Corso-Díaz, A Swaroop Nucleic Acids Research 50 (6), e35-e35, 2022 | 20 | 2022 |
| Context-dependent CpG methylation directs cell-specific binding of transcription factor ZBTB38 C Marchal, PA Defossez, B Miotto Epigenetics 17 (13), 2122-2143, 2022 | 15 | 2022 |
| Molecular and Clinical Relevance of ZBTB38 Expression Levels in Prostate Cancer M de Dieuleveult, C Marchal, A Jouinot, A Letessier, B Miotto Cancers 12 (5), 1106, 2020 | 15 | 2020 |
| Depletion of ZBTB38 potentiates the effects of DNA demethylating agents in cancer cells via CDKN1C mRNA up-regulation C Marchal, M de Dieuleveult, C Saint-Ruf, N Guinot, L Ferry, ... Oncogenesis 7 (10), 82, 2018 | 15 | 2018 |
| An integrated view of the structure and function of the human 4D nucleome J Dekker, BA Oksuz, Y Zhang, Y Wang, MK Minsk, S Kuang, L Yang, ... Nature, 1-18, 2025 | 14 | 2025 |
| Stage-specific dynamic reorganization of genome topology shapes transcriptional neighborhoods in developing human retinal organoids Z Qu, Z Batz, N Singh, C Marchal, A Swaroop Cell reports 42 (12), 2023 | 5 | 2023 |
| Aerobic glycolysis and lactate regulate histone H3K18Lactylation occupancy to fine-tune gene expression in developing and mature retina M Gaur, X Liang, MJ Brooks, K Jiang, A Kumari, MA English, P Cifani, ... bioRxiv, 2025.04. 17.649437, 2025 | 2 | 2025 |
| HiCRes: a computational method to estimate and predict the resolution of HiC libraries C Marchal, N Singh, X Corso-Díaz, A Swaroop bioRxiv, 2020.09. 22.307967, 2020 | 2 | 2020 |
| Genome wide mapping of promoter-anchored interactions in the human retina N Singh, C Marchal, J Gentry, C Jaeger, X Corso-Díaz, A Swaroop Investigative Ophthalmology & Visual Science 61 (7), 4991-4991, 2020 | 1 | 2020 |
| Repli-seq: genome-wide analysis of replication timing by next-generation sequencing C Marchal, T Sasaki, D Vera, K Wilson, J Sima, JC Rivera-Mulia, ... | 1 | 2017 |
| Epigenetic landscape of DNA methylation valleys in rod photoreceptors XC Diaz, N Singh, C Marchal, A Swaroop Investigative Ophthalmology & Visual Science 66 (8), 3569-3569, 2025 | | 2025 |
| Dynamic nuclear organization of NRL condensates in rod photoreceptors A Kumari, C Marchal, RN Fariss, A Swaroop Investigative Ophthalmology & Visual Science 66 (8), 796-796, 2025 | | 2025 |
