| A large-scale evaluation of computational protein function prediction P Radivojac, WT Clark, TR Oron, AM Schnoes, T Wittkop, A Sokolov, ... Nature methods, 2013 | 1256 | 2013 |
| The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ... Genome biology 20 (1), 244, 2019 | 527 | 2019 |
| An expanded evaluation of protein function prediction methods shows an improvement in accuracy Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ... Genome biology 17 (1), 184, 2016 | 486 | 2016 |
| Argot2: a large scale function prediction tool relying on semantic similarity of weighted Gene Ontology terms M Falda, S Toppo, A Pescarolo, E Lavezzo, B Di Camillo, A Facchinetti, ... BMC bioinformatics 13 (Suppl 4), S14, 2012 | 163 | 2012 |
| Optimizing PCR primers targeting the bacterial 16S ribosomal RNA gene F Sambo, F Finotello, E Lavezzo, G Baruzzo, G Masi, E Peta, M Falda, ... BMC bioinformatics 19 (1), 343, 2018 | 96 | 2018 |
| Enhancing protein function prediction with taxonomic constraints–The Argot2. 5 web server E Lavezzo, M Falda, P Fontana, L Bianco, S Toppo Methods 93, 15-23, 2016 | 76 | 2016 |
| Comparative analysis of algorithms for whole-genome assembly of pyrosequencing data F Finotello, E Lavezzo, P Fontana, D Peruzzo, A Albiero, L Barzon, ... Briefings in bioinformatics 13 (3), 269-280, 2012 | 36 | 2012 |
| Fast Regulation of Hormone Metabolism Contributes to Salt Tolerance in Rice (Oryza sativa spp. Japonica, L.) by Inducing Specific Morpho-Physiological … E Formentin, E Barizza, P Stevanato, M Falda, F Massa, D Tarkowskà, ... Plants 7 (3), 75, 2018 | 34 | 2018 |
| Genomic comparative analysis and gene function prediction in infectious diseases: application to the investigation of a meningitis outbreak E Lavezzo, S Toppo, E Franchin, B Di Camillo, F Finotello, M Falda, ... BMC infectious diseases 13 (1), 554, 2013 | 32 | 2013 |
| Integrating quantitative and qualitative constraints in fuzzy temporal networks S Badaloni, M Falda, M Giacomin AI Communications 17 (4), 183-272, 2004 | 23 | 2004 |
| Quantitative label-free redox proteomics of reversible cysteine oxidation in red blood cell membranes M Zaccarin, M Falda, A Roveri, V Bosello-Travain, L Bordin, M Maiorino, ... Free Radical Biology and Medicine 71, 90-98, 2014 | 21 | 2014 |
| Integrating quantitative and qualitative fuzzy temporal constraints S Badaloni, M Falda, M Giacomin Ai Communications 17 (4), 187-200, 2004 | 21 | 2004 |
| Solving temporal over-constrained problems using fuzzy techniques S Badaloni, M Falda and, M Giacomin Journal of Intelligent & Fuzzy Systems 18 (3), 255-265, 2007 | 18 | 2007 |
| Dynamic consistency of fuzzy conditional temporal problems M Falda, F Rossi, KB Venable Journal of Intelligent Manufacturing 21 (1), 75-88, 2010 | 15 | 2010 |
| Pathway Inspector: a pathway based web application for RNAseq analysis of model and non-model organisms L Bianco, S Riccadonna, E Lavezzo, M Falda, E Formentin, D Cavalieri, ... Bioinformatics 33 (3), 453-455, 2017 | 14 | 2017 |
| Temporal-based medical diagnoses using a fuzzy temporal reasoning system S Badaloni, M Falda Journal of Intelligent Manufacturing 21 (1), 145-153, 2010 | 14 | 2010 |
| High confidence and sensitivity four-dimensional fractionation for human plasma proteome analysis R Millioni, S Tolin, GP Fadini, M Falda, B van Breukelen, P Tessari, ... Amino acids 43 (5), 2199-2202, 2012 | 13 | 2012 |
| Redox status in a model of cancer stem cells M Zaccarin, V Bosello-Travain, ML Di Paolo, M Falda, M Maiorino, ... Archives of Biochemistry and Biophysics 617, 120-128, 2017 | 11 | 2017 |
| keeSeek: searching distant non-existing words in genomes for PCR-based applications M Falda, P Fontana, L Barzon, S Toppo, E Lavezzo Bioinformatics 30 (18), 2662-2664, 2014 | 11 | 2014 |
| SimBioNeT: a simulator of biological network topology B Di Camillo, M Falda, G Toffolo, C Cobelli IEEE/ACM transactions on computational biology and bioinformatics 9 (2), 592-600, 2011 | 10 | 2011 |
