| Network-based integration of multi-omics data for prioritizing cancer genes C Dimitrakopoulos, SK Hindupur, L Häfliger, J Behr, H Montazeri, MN Hall, ... Bioinformatics 34 (14), 2441-2448, 2018 | 184 | 2018 |
| Computational approaches for the identification of cancer genes and pathways CM Dimitrakopoulos, N Beerenwinkel Wiley Interdisciplinary Reviews: Systems Biology and Medicine 9 (1), e1364, 2017 | 107 | 2017 |
| Predicting protein complexes from weighted protein–protein interaction graphs with a novel unsupervised methodology: evolutionary enhanced Markov clustering K Theofilatos, N Pavlopoulou, C Papasavvas, S Likothanassis, ... Artificial intelligence in medicine 63 (3), 181-189, 2015 | 53 | 2015 |
| Identification and validation of a biomarker signature in patients with resectable pancreatic cancer via genome-wide screening for functional genetic variants C Dimitrakopoulos, B Vrugt, R Flury, P Schraml, U Knippschild, P Wild, ... JAMA surgery 154 (6), e190484-e190484, 2019 | 37 | 2019 |
| Computational approaches for the prediction of protein-protein interactions: a survey K A Theofilatos, C M Dimitrakopoulos, A K Tsakalidis, S D Likothanassis, ... Current Bioinformatics 6 (4), 398-414, 2011 | 33 | 2011 |
| Ectopic expression of Msx2 in mammalian myotubes recapitulates aspects of amphibian muscle dedifferentiation A Yilmaz, R Engeler, S Constantinescu, KD Kokkaliaris, ... Stem cell research 15 (3), 542-553, 2015 | 19 | 2015 |
| Multi-omics data integration reveals novel drug targets in hepatocellular carcinoma C Dimitrakopoulos, SK Hindupur, M Colombi, D Liko, CKY Ng, ... BMC genomics 22 (1), 592, 2021 | 18 | 2021 |
| Scale-space measures for graph topology link protein network architecture to function M Hulsman, C Dimitrakopoulos, J de Ridder Bioinformatics 30 (12), i237-i245, 2014 | 16 | 2014 |
| Predicting overlapping protein complexes from weighted protein interaction graphs by gradually expanding dense neighborhoods C Dimitrakopoulos, K Theofilatos, A Pegkas, S Likothanassis, S Mavroudi Artificial intelligence in medicine 71, 62-69, 2016 | 12 | 2016 |
| The Human Interactome Knowledge Base (HINT-KB): an integrative human protein interaction database enriched with predicted protein–protein interaction scores using a novel … K Theofilatos, C Dimitrakopoulos, S Likothanassis, D Kleftogiannis, ... Artificial Intelligence Review 42 (3), 427-443, 2014 | 11 | 2014 |
| A new hybrid method for predicting protein interactions using Genetic Algorithms and Extended Kalman Filters KA Theofilatos, CM Dimitrakopoulos, AK Tsakalidis, SD Likothanassis, ... Proceedings of the 10th IEEE International Conference on Information …, 2010 | 7 | 2010 |
| Efficient computational construction of weighted protein-protein interaction networks using adaptive filtering techniques combined with natural selection-based heuristic algorithms CM Dimitrakopoulos, KA Theofilatos, EF Georgopoulos, S Likothanassis, ... Bioinformatics: Concepts, Methodologies, Tools, and Applications, 1237-1251, 2013 | 6 | 2013 |
| Generalized computational framework and system for integrative prediction of biomarkers K Theofilatos, C Alexakos, A Korfiati, C Dimitrakopoulos, S Mavroudi US Patent App. 15/837,407, 2018 | 5 | 2018 |
| Efficient computational prediction and scoring of human protein-Protein interactions using a novel gene expression programming methodology K Theofilatos, C Dimitrakopoulos, M Antoniou, E Georgopoulos, ... International Conference on Engineering Applications of Neural Networks, 472-481, 2012 | 5 | 2012 |
| InSyBio BioNets: an efficient tool for network-based biomarker discovery K Theofilatos, C Dimitrakopoulos, C Alexakos, A Korfiati, S Likothanassis, ... EMBnet. journal 22, 871, 2016 | 4 | 2016 |
| Mining student learning behavior and self-assessment for adaptive learning management system K Moutafi, P Vergeti, C Alexakos, C Dimitrakopoulos, K Giotopoulos, ... International Conference on Engineering Applications of Neural Networks, 70-79, 2013 | 4 | 2013 |
| HINT-KB: The human interactome knowledge base K Theofilatos, C Dimitrakopoulos, D Kleftogiannis, C Moschopoulos, ... IFIP International Conference on Artificial Intelligence Applications and …, 2012 | 3 | 2012 |
| Enhanced Weighted Restricted Neighborhood Search Clustering: A Novel Algorithm for Detecting Human Protein Complexes from Weighted Protein-Protein Interaction Graphs C Dimitrakopoulos, K Theofilatos, A Pegkas, S Likothanassis, S Mavroudi International Conference on Engineering Applications of Neural Networks, 231-240, 2013 | 2 | 2013 |
| Protein functional and sub-cellular annotation in a proteome K Theofilatos, C Dimitrakopoulos, S Mavroudi, A Korfiati, C Alexakos US Patent App. 15/361,461, 2017 | 1 | 2017 |
| A New Framework for Bridging the Gap from Protein-Protein Interactions to Biological Process Interactions C Dimitrakopoulos, AD Vlantis, K Theofilatos, S Likothanassis, ... IFIP International Conference on Artificial Intelligence Applications and …, 2014 | 1 | 2014 |
