| Stem cell differentiation trajectories in Hydra resolved at single-cell resolution S Siebert, JA Farrell, JF Cazet, Y Abeykoon, AS Primack, CE Schnitzler, ... Science 365 (6451), eaav9314, 2019 | 422 | 2019 |
| Phylogenomic analyses support traditional relationships within Cnidaria F Zapata, FE Goetz, SA Smith, M Howison, S Siebert, SH Church, ... PloS one 10 (10), e0139068, 2015 | 252 | 2015 |
| Single-cell transcriptome reveals insights into the development and function of the zebrafish ovary Y Liu, ME Kossack, ME McFaul, LN Christensen, S Siebert, SR Wyatt, ... Elife 11, e76014, 2022 | 116 | 2022 |
| Identification of a kazal-type serine protease inhibitor with potent anti-staphylococcal activity as part of Hydra's innate immune system R Augustin, S Siebert, TCG Bosch Developmental & Comparative Immunology 33 (7), 830-837, 2009 | 116 | 2009 |
| Molecular mechanisms driving switch behavior in xylem cell differentiation GM Turco, J Rodriguez-Medina, S Siebert, D Han, ... Cell reports 28 (2), 342-351. e4, 2019 | 114 | 2019 |
| Pairwise comparisons across species are problematic when analyzing functional genomic data CW Dunn, F Zapata, C Munro, S Siebert, A Hejnol Proceedings of the National Academy of Sciences 115 (3), E409-E417, 2018 | 113 | 2018 |
| Cell type complexity in the basal metazoan Hydra is maintained by both stem cell based mechanisms and transdifferentiation S Siebert, F Anton-Erxleben, TCG Bosch Developmental biology 313 (1), 13-24, 2008 | 109 | 2008 |
| Dickkopf related genes are components of the positional value gradient in Hydra R Augustin, A Franke, K Khalturin, R Kiko, S Siebert, G Hemmrich, ... Developmental biology 296 (1), 62-70, 2006 | 106 | 2006 |
| Characterization of differential transcript abundance through time during Nematostella vectensisdevelopment RR Helm, S Siebert, S Tulin, J Smith, CW Dunn BMC genomics 14 (1), 266, 2013 | 93 | 2013 |
| A chromosome-scale epigenetic map of the Hydra genome reveals conserved regulators of cell state JF Cazet, S Siebert, HM Little, P Bertemes, AS Primack, P Ladurner, ... Genome research 33 (2), 283-298, 2023 | 61 | 2023 |
| Systems-level properties of EGFR-RAS-ERK signaling amplify local signals to generate dynamic gene expression heterogeneity AE Davies, M Pargett, S Siebert, TE Gillies, Y Choi, SJ Tobin, AR Ram, ... Cell systems 11 (2), 161-175. e5, 2020 | 55 | 2020 |
| Differential gene expression in the siphonophore Nanomia bijuga (Cnidaria) assessed with multiple next-generation sequencing workflows S Siebert, MD Robinson, SC Tintori, F Goetz, RR Helm, SA Smith, ... PloS one 6 (7), e22953, 2011 | 53 | 2011 |
| Sex, polyps, and medusae: Determination and maintenance of sex in cnidarians S Siebert, CE Juliano Molecular reproduction and development 84 (2), 105-119, 2017 | 45 | 2017 |
| Evolution of gene expression across species and specialized zooids in Siphonophora C Munro, F Zapata, M Howison, S Siebert, CW Dunn Molecular Biology and Evolution 39 (2), msac027, 2022 | 44 | 2022 |
| Improved phylogenetic resolution within Siphonophora (Cnidaria) with implications for trait evolution C Munro, S Siebert, F Zapata, M Howison, A Damian-Serrano, SH Church, ... Molecular phylogenetics and evolution 127, 823-833, 2018 | 40 | 2018 |
| PIWI–piRNA pathway-mediated transposable element repression in Hydra somatic stem cells BB Teefy, S Siebert, JF Cazet, H Lin, CE Juliano Rna 26 (5), 550-563, 2020 | 39 | 2020 |
| Stem cells in Nanomia bijuga (Siphonophora), a colonial animal with localized growth zones S Siebert, FE Goetz, SH Church, P Bhattacharyya, F Zapata, ... EvoDevo 6 (1), 22, 2015 | 35 | 2015 |
| Control of foot differentiation in Hydra: phylogenetic footprinting indicates interaction of head, bud and foot patterning systems S Siebert, S Thomsen, MM Reimer, TCG Bosch Mechanisms of development 122 (9), 998-1007, 2005 | 28 | 2005 |
| Re-evaluation of characters in Apolemiidae (Siphonophora), with description of two new species from Monterey Bay, California S Siebert, PR Pugh, SHD Haddock, CW Dunn Zootaxa 3702 (3), 201–232-201–232, 2013 | 26 | 2013 |
| Stem cell differentiation trajectories in Hydra resolved at single-cell resolution. Science 365, eaav9314 S Siebert, JA Farrell, JF Cazet, Y Abeykoon, AS Primack, CE Schnitzler, ... DOI: https://doi. org/10.1126/science. aav9314, PMID 31346039, 2019 | 25 | 2019 |
