| Comprehensive transcriptional analysis of early-stage urothelial carcinoma J Hedegaard, P Lamy, I Nordentoft, F Algaba, S Høyer, BP Ulhøi, S Vang, ... Cancer cell 30 (1), 27-42, 2016 | 700 | 2016 |
| Gut microbiota linked to sexual preference and HIV infection M Noguera-Julian, M Rocafort, Y Guillén, J Rivera, M Casadellà, P Nowak, ... EBioMedicine 5, 135-146, 2016 | 475 | 2016 |
| Letter to the Editor: Stability of Random Forest importance measures ML Calle, V Urrea Briefings in bioinformatics 12 (1), 86-89, 2011 | 421 | 2011 |
| Statistical analysis of metagenomics data ML Calle Genomics & informatics 17 (1), e6, 2019 | 324 | 2019 |
| Balances: a new perspective for microbiome analysis J Rivera-Pinto, JJ Egozcue, V Pawlowsky-Glahn, R Paredes, ... MSystems 3 (4), 10.1128/msystems. 00053-18, 2018 | 261 | 2018 |
| Tutorial on methods for interval-censored data and their implementation in R G Gómez, ML Calle, R Oller, K Langohr Statistical Modelling 9 (4), 259-297, 2009 | 184 | 2009 |
| AUC-RF: a new strategy for genomic profiling with random forest ML Calle, V Urrea, AL Boulesteix, N Malats Human heredity 72 (2), 121-132, 2011 | 182 | 2011 |
| Challenges in the Integration of Omics and Non-Omics Data E López de Maturana, L Alonso, P Alarcón, IA Martín-Antoniano, S Pineda, ... Genes 10 (3), 238, 2019 | 178 | 2019 |
| Model‐Based Multifactor Dimensionality Reduction for detecting epistasis in case–control data in the presence of noise T Cattaert, ML Calle, SM Dudek, JM Mahachie John, F Van Lishout, ... Annals of human genetics 75 (1), 78-89, 2011 | 148* | 2011 |
| mbmdr: an R package for exploring gene–gene interactions associated with binary or quantitative traits ML Calle, V Urrea, N Malats, K Van Steen Bioinformatics 26 (17), 2198-2199, 2010 | 124 | 2010 |
| Evolution of the gut microbiome following acute HIV-1 infection M Rocafort, M Noguera-Julian, J Rivera, L Pastor, Y Guillén, J Langhorst, ... Microbiome 7 (1), 73, 2019 | 117 | 2019 |
| Improving strategies for detecting genetic patterns of disease susceptibility in association studies ML Calle, V Urrea, G Vellalta, N Malats, KV Steen Statistics in medicine 27 (30), 6532-6546, 2008 | 115 | 2008 |
| Variable selection in microbiome compositional data analysis A Susin, Y Wang, KA Lê Cao, ML Calle NAR Genomics and Bioinformatics 2 (2), lqaa029, 2020 | 114 | 2020 |
| Richer gut microbiota with distinct metabolic profile in HIV infected Elite Controllers J Vesterbacka, J Rivera, K Noyan, M Parera, U Neogi, M Calle, R Paredes, ... Scientific reports 7 (1), 6269, 2017 | 114 | 2017 |
| Genetic susceptibility to distinct bladder cancer subphenotypes LT Guey, M García-Closas, C Murta-Nascimento, J Lloreta, L Palencia, ... European urology 57 (2), 283-292, 2010 | 104 | 2010 |
| Low nadir CD4+ T-cell counts predict gut dysbiosis in HIV-1 infection Y Guillén, M Noguera-Julian, J Rivera, M Casadellà, AS Zevin, M Rocafort, ... Mucosal immunology 12 (1), 232-246, 2019 | 98 | 2019 |
| Risk prediction scores for recurrence and progression of non-muscle invasive bladder cancer: An international validation in primary tumours MM Vedder, M Márquez, EW de Bekker-Grob, ML Calle, L Dyrskjøt, ... PloS one 9 (6), e96849, 2014 | 91 | 2014 |
| coda4microbiome: compositional data analysis for microbiome cross-sectional and longitudinal studies ML Calle, M Pujolassos, A Susin BMC bioinformatics 24 (1), 82, 2023 | 82 | 2023 |
| Frequentist and Bayesian approaches for interval-censored data G Gomez, ML Calle, R Oller Statistical Papers 45 (2), 139-173, 2004 | 76 | 2004 |
| Interval censoring: model characterizations for the validity of the simplified likelihood R Oller, G Gómez, ML Calle Canadian Journal of Statistics 32 (3), 315-326, 2004 | 75 | 2004 |
