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Joshua K. Michener
Joshua K. Michener
Verified email at ornl.gov - Homepage
Title
Cited by
Cited by
Year
High-throughput enzyme evolution in Saccharomyces cerevisiae using a synthetic RNA switch
JK Michener, CD Smolke
Metabolic Engineering, 2012
1942012
Applications of genetically-encoded biosensors for the construction and control of biosynthetic pathways
JK Michener, K Thodey, JC Liang, CD Smolke
Metabolic Engineering, 2011
1892011
Engineered Pseudomonas putida simultaneously catabolizes five major components of corn stover lignocellulose: Glucose, xylose, arabinose, p-coumaric acid, and acetic acid
JR Elmore, GN Dexter, D Salvachúa, M O'Brien, DM Klingeman, K Gorday, ...
Metabolic Engineering 62, 62-71, 2020
1292020
Identification and treatment of heme depletion attributed to overexpression of a lineage of evolved P450 monooxygenases
JK Michener, J Nielsen, CD Smolke
Proceedings of the National Academy of Sciences, 2012
1032012
Rapid, parallel identification of catabolism pathways of lignin-derived aromatic compounds in Novosphingobium aromaticivorans
JH Cecil, DC Garcia, RJ Giannone, JK Michener
Applied and environmental microbiology 84 (22), e01185-18, 2018
742018
Ecosystem consequences of introducing plant growth promoting rhizobacteria to managed systems and potential legacy effects
JAM Moore, PE Abraham, JK Michener, W Muchero, MA Cregger
New Phytologist 234 (6), 1914-1918, 2022
732022
Construction and optimization of a heterologous pathway for protocatechuate catabolism in Escherichia coli enables bioconversion of model aromatic compounds
SM Clarkson, RJ Giannone, DM Kridelbaugh, JG Elkins, AM Guss, ...
Applied and environmental microbiology 83 (18), e01313-17, 2017
732017
Plant–Microbe Interactions: From Genes to Ecosystems Using Populus as a Model System
MA Cregger, DL Carper, S Christel, MJ Doktycz, J Labbé, JK Michener, ...
Phytobiomes Journal 5 (1), 29-38, 2021
602021
Hardwood tree genomics: unlocking woody plant biology
GA Tuskan, AT Groover, J Schmutz, SP DiFazio, A Myburg, D Grattapaglia, ...
Frontiers in plant science 9, 1799, 2018
562018
Controlled Measurement and Comparative Analysis of Cellular Components in E. coli Reveals Broad Regulatory Changes in Response to Glucose Starvation
JR Houser, C Barnhart, DR Boutz, SM Carroll, A Dasgupta, JK Michener, ...
PLoS computational biology 11 (8), e1004400, 2015
562015
Pathway discovery and engineering for cleavage of a β-1 lignin-derived biaryl compound
GN Presley, AZ Werner, R Katahira, DC Garcia, SJ Haugen, KJ Ramirez, ...
Metabolic Engineering 65, 1-10, 2021
542021
Microbial assimilation of lignin-derived aromatic compounds and conversion to value-added products
CC Azubuike, MN Allemann, JK Michener
Current Opinion in Microbiology 65, 64-72, 2022
532022
Effective use of a horizontally-transferred pathway for dichloromethane catabolism requires post–transfer refinement
JK Michener, AA Camargo Neves, S Vuilleumier, F Bringel, CJ Marx
Elife 3, e04279, 2014
422014
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements
A Bilbao, N Munoz, J Kim, DJ Orton, Y Gao, K Poorey, KR Pomraning, ...
Nature Communications 14 (1), 2461, 2023
412023
Evaluation of chromosomal insertion loci in the Pseudomonas putida KT2440 genome for predictable biosystems design
JE Chaves, R Wilton, Y Gao, NM Munoz, MC Burnet, Z Schmitz, J Rowan, ...
Metabolic engineering communications 11, e00139, 2020
382020
Phylogeny poorly predicts the utility of a challenging horizontally transferred gene in Methylobacterium species
JK Michener, S Vuilleumier, F Bringel, CJ Marx
Journal of Bacteriology 196 (11), 2101-2107, 2014
342014
Pseudodesulfovibrio mercurii sp. nov., a mercury-methylating bacterium isolated from sediment
CC Gilmour, AB Soren, CM Gionfriddo, M Podar, JD Wall, SD Brown, ...
International journal of systematic and evolutionary microbiology 71 (3), 004697, 2021
262021
Deep data analytics for genetic engineering of diatoms linking genotype to phenotype via machine learning
AA Trofimov, AA Pawlicki, N Borodinov, S Mandal, TJ Mathews, ...
npj Computational Materials 5 (1), 67, 2019
242019
Discovery, characterization, and metabolic engineering of Rieske non-heme iron monooxygenases for guaiacol O-demethylation
A Bleem, E Kuatsjah, GN Presley, DJ Hinchen, M Zahn, DC Garcia, ...
Chem Catalysis 2 (8), 1989-2011, 2022
232022
Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation
E Kuatsjah, M Zahn, X Chen, R Kato, DJ Hinchen, MO Konev, R Katahira, ...
Proceedings of the National Academy of Sciences 120 (4), e2212246120, 2023
212023
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Articles 1–20