| Non-neuronal expression of SARS-CoV-2 entry genes in the olfactory system suggests mechanisms underlying COVID-19-associated anosmia DH Brann, T Tsukahara, C Weinreb, M Lipovsek, K Van den Berge, ... Science Advances, eabc5801, 2020 | 1583* | 2020 |
| Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo DE Wagner, C Weinreb, ZM Collins, JA Briggs, SG Megason, AM Klein Science 360 (6392), 981-987, 2018 | 899 | 2018 |
| Lineage tracing on transcriptional landscapes links state to fate during differentiation C Weinreb, A Rodriguez-Fraticelli, FD Camargo, AM Klein Science 367 (6479), eaaw3381, 2020 | 778 | 2020 |
| Clonal analysis of lineage fate in native haematopoiesis AE Rodriguez-Fraticelli, SL Wolock, CS Weinreb, R Panero, SH Patel, ... Nature 553 (7687), 212-216, 2018 | 719 | 2018 |
| The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution JA Briggs, C Weinreb, DE Wagner, S Megason, L Peshkin, MW Kirschner, ... Science 360 (6392), eaar5780, 2018 | 637 | 2018 |
| Population snapshots predict early haematopoietic and erythroid hierarchies BK Tusi, SL Wolock, C Weinreb, Y Hwang, D Hidalgo, R Zilionis, ... Nature 555 (7694), 54-60, 2018 | 428 | 2018 |
| Fundamental limits on dynamic inference from single-cell snapshots C Weinreb, S Wolock, BK Tusi, M Socolovsky, AM Klein Proceedings of the National Academy of Sciences 115 (10), E2467-E2476, 2018 | 388 | 2018 |
| COVID-19 and the chemical senses: supporting players take center stage KW Cooper, DH Brann, MC Farruggia, S Bhutani, R Pellegrino, ... Neuron 107 (2), 219-233, 2020 | 377 | 2020 |
| SPRING: a kinetic interface for visualizing high dimensional single-cell expression data C Weinreb, S Wolock, AM Klein Bioinformatics 34 (7), 1246-1248, 2018 | 365 | 2018 |
| Single-cell lineage tracing unveils a role for TCF15 in haematopoiesis AE Rodriguez-Fraticelli, C Weinreb, SW Wang, RP Migueles, M Jankovic, ... Nature 583 (7817), 585-589, 2020 | 280 | 2020 |
| A single-cell hematopoietic landscape resolves 8 lineage trajectories and defects in Kit mutant mice JS Dahlin, FK Hamey, B Pijuan-Sala, M Shepherd, WWY Lau, ... Blood, The Journal of the American Society of Hematology 131 (21), e1-e11, 2018 | 253 | 2018 |
| Keypoint-MoSeq: parsing behavior by linking point tracking to pose dynamics C Weinreb, JE Pearl, S Lin, MAM Osman, L Zhang, S Annapragada, ... Nature Methods 21 (7), 1329-1339, 2024 | 217 | 2024 |
| 3D RNA and functional interactions from evolutionary couplings C Weinreb, AJ Riesselman, JB Ingraham, T Gross, C Sander, DS Marks Cell 165 (4), 963-975, 2016 | 206 | 2016 |
| Spontaneous behaviour is structured by reinforcement without explicit reward JE Markowitz, WF Gillis, M Jay, J Wood, RW Harris, R Cieszkowski, ... Nature 614 (7946), 108-117, 2023 | 203 | 2023 |
| Identification of hierarchical chromatin domains C Weinreb, BJ Raphael Bioinformatics 32 (11), 1601-1609, 2016 | 199 | 2016 |
| Lifelong multilineage contribution by embryonic-born blood progenitors SH Patel, C Christodoulou, C Weinreb, Q Yu, EL da Rocha, ... Nature 606 (7915), 747-753, 2022 | 153 | 2022 |
| Lineage reconstruction from clonal correlations C Weinreb, AM Klein Proceedings of the National Academy of Sciences 117 (29), 17041-17048, 2020 | 40 | 2020 |
| The molecular dialog between flowering plant reproductive partners defined by SNP-informed RNA-sequencing AR Leydon, C Weinreb, E Venable, A Reinders, JM Ward, MA Johnson The Plant Cell 29 (5), 984-1006, 2017 | 38 | 2017 |
| Transcriptional profiling of sequentially generated septal neuron fates MT García, SK Stegmann, TE Lacey, CM Reid, S Hrvatin, C Weinreb, ... Elife 10, e71545, 2021 | 31 | 2021 |
| Characterizing the structure of mouse behavior using Motion Sequencing S Lin, WF Gillis, C Weinreb, A Zeine, SC Jones, EM Robinson, ... Nature Protocols 19 (11), 3242-3291, 2024 | 27 | 2024 |
