| Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape RC O’Malley, SC Huang, L Song, MG Lewsey, A Bartlett, JR Nery, M Galli, ... Cell 165 (5), 1280-1292, 2016 | 1698 | 2016 |
| Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions T Kawakatsu, SC Huang, F Jupe, E Sasaki, RJ Schmitz, MA Urich, ... Cell 166 (2), 492-505, 2016 | 772 | 2016 |
| Mapping genome-wide transcription-factor binding sites using DAP-seq. A Bartlett, RC O'Malley, SC Huang, M Galli, JR Nery, A Gallavotti, ... Nature protocols 12 (8), 1659-1672, 2017 | 655 | 2017 |
| Cryptochromes Interact Directly with PIFs to Control Plant Growth in Limiting Blue Light UV Pedmale, SC Huang, M Zander, BJ Cole, J Hetzel, K Ljung, PAB Reis, ... Cell 164 (1-2), 233–245, 2016 | 643 | 2016 |
| Processing and subcellular trafficking of ER-tethered EIN2 control response to ethylene gas H Qiao, Z Shen, SC Huang, RJ Schmitz, MA Urich, SP Briggs, JR Ecker Science 338 (6105), 390-393, 2012 | 602 | 2012 |
| A transcription factor hierarchy defines an environmental stress response network L Song, SC Huang, A Wise, R Castanon, JR Nery, H Chen, M Watanabe, ... Science 354 (6312), aag1550, 2016 | 538 | 2016 |
| Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis KN Chang, S Zhong, MT Weirauch, G Hon, M Pelizzola, H Li, SC Huang, ... eLife 2, 2013 | 454 | 2013 |
| Integrating proteomic, transcriptional, and interactome data reveals hidden components of signaling and regulatory networks SC Huang, E Fraenkel Science Signalling 2 (81), ra40, 2009 | 217 | 2009 |
| Pseudomonas aeruginosa Genome Database and PseudoCAP: facilitating community-based, continually updated, genome annotation GL Winsor, R Lo, SJH Sui, KSE Ung, S Huang, D Cheng, WKH Ching, ... Nucleic acids research 33 (suppl_1), D338-D343, 2005 | 205 | 2005 |
| CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping SA Wanamaker, RM Garza, A MacWilliams, JR Nery, A Bartlett, ... Nature methods 14 (8), 819-825, 2017 | 196 | 2017 |
| Simultaneous reconstruction of multiple signaling pathways via the prize-collecting Steiner forest problem N Tuncbag, A Braunstein, A Pagnani, SSC Huang, J Chayes, C Borgs, ... Journal of computational biology 20 (2), 124-136, 2013 | 144 | 2013 |
| SteinerNet: a web server for integrating ‘omic’data to discover hidden components of response pathways N Tuncbag, S McCallum, SC Huang, E Fraenkel Nucleic Acids Research 40 (W1), W505-W509, 2012 | 92 | 2012 |
| Mapping transcription factor interactome networks using HaloTag protein arrays J Yazaki, M Galli, AY Kim, K Nito, F Aleman, KN Chang, AR Carvunis, ... Proceedings of the National Academy of Sciences 113 (29), E4238-E4247, 2016 | 88 | 2016 |
| Vision, challenges and opportunities for a Plant Cell Atlas SG Jha, AT Borowsky, BJ Cole, N Fahlgren, A Farmer, SC Huang, P Karia, ... Elife 10, e66877, 2021 | 70 | 2021 |
| Linking Proteomic and Transcriptional Data through the Interactome and Epigenome Reveals a Map of Oncogene-induced Signaling SC Huang, DC Clarke, SJC Gosline, A Labadorf, CR Chouinard, ... PLOS Computational Biology 9 (2), e1002887, 2013 | 67 | 2013 |
| Double DAP-seq uncovered synergistic DNA binding of interacting bZIP transcription factors M Li, T Yao, W Lin, WE Hinckley, M Galli, W Muchero, A Gallavotti, ... Nature Communications 14 (1), 2600, 2023 | 63 | 2023 |
| Direct regulation of shikimate, early phenylpropanoid, and stilbenoid pathways by Subgroup 2 R2R3‐MYBs in grapevine L Orduña, M Li, D Navarro‐Payá, C Zhang, A Santiago, P Romero, ... The Plant Journal 110 (2), 529-547, 2022 | 51 | 2022 |
| Elucidating the biology of transcription factor–DNA interaction for accurate identification of cis-regulatory elements M Hajheidari, SC Huang Current Opinion in Plant Biology 68, 102232, 2022 | 50 | 2022 |
| Cannabinoid exposure in rat adolescence reprograms the initial behavioral, molecular, and epigenetic response to cocaine M Scherma, JS Qvist, A Asok, S Huang, P Masia, M Deidda, YB Wei, ... Proceedings of the National Academy of Sciences 117 (18), 9991-10002, 2020 | 48 | 2020 |
| MYB24 orchestrates terpene and flavonol metabolism as light responses to anthocyanin depletion in variegated grape berries C Zhang, Z Dai, T Ferrier, L Orduña, A Santiago, A Peris, DCJ Wong, ... The Plant Cell 35 (12), 4238-4265, 2023 | 45 | 2023 |
Joseph R. EckerHoward Hughes Medical Institute and The Salk Institute for Biological StudiesVerified email at Salk.edu
