| SAbDab: the structural antibody database J Dunbar, K Krawczyk, J Leem, T Baker, A Fuchs, G Georges, J Shi, ... Nucleic acids research 42 (D1), D1140-D1146, 2014 | 796 | 2014 |
| Observed antibody space: a resource for data mining next-generation sequencing of antibody repertoires A Kovaltsuk, J Leem, S Kelm, J Snowden, CM Deane, K Krawczyk The Journal of Immunology 201 (8), 2502-2509, 2018 | 292 | 2018 |
| ABodyBuilder: Automated antibody structure prediction with data–driven accuracy estimation J Leem, J Dunbar, G Georges, J Shi, CM Deane MAbs 8 (7), 1259-1268, 2016 | 267 | 2016 |
| SAbPred: a structure-based antibody prediction server J Dunbar, K Krawczyk, J Leem, C Marks, J Nowak, C Regep, G Georges, ... Nucleic acids research 44 (W1), W474-W478, 2016 | 247 | 2016 |
| Deciphering the language of antibodies using self-supervised learning J Leem, LS Mitchell, JHR Farmery, J Barton, JD Galson Patterns 3 (7), 2022 | 184 | 2022 |
| STCRDab: the structural T-cell receptor database J Leem, SHP de Oliveira, K Krawczyk, CM Deane Nucleic acids research 46 (D1), D406-D412, 2018 | 136 | 2018 |
| Comparative analysis of the CDR loops of antigen receptors WK Wong, J Leem, CM Deane Frontiers in immunology 10, 2454, 2019 | 102 | 2019 |
| Structurally mapping antibody repertoires K Krawczyk, S Kelm, A Kovaltsuk, JD Galson, D Kelly, J Trück, C Regep, ... Frontiers in immunology 9, 1698, 2018 | 52 | 2018 |
| SCALOP: sequence-based antibody canonical loop structure annotation WK Wong, G Georges, F Ros, S Kelm, AP Lewis, B Taddese, J Leem, ... Bioinformatics 35 (10), 1774-1776, 2019 | 38 | 2019 |
| Antibody side chain conformations are position‐dependent J Leem, G Georges, J Shi, CM Deane Proteins: Structure, Function, and Bioinformatics 86 (4), 383-392, 2018 | 31 | 2018 |
| AbDiver: a tool to explore the natural antibody landscape to aid therapeutic design J Młokosiewicz, P Deszyński, W Wilman, I Jaszczyszyn, R Ganesan, ... Bioinformatics 38 (9), 2628-2630, 2022 | 25 | 2022 |
| Enhancing antibody language models with structural information J Barton, JD Galson, J Leem BioRxiv, 2023.12. 12.569610, 2024 | 24 | 2024 |
| ABodyBuilder: Automated antibody structure prediction with data-driven accuracy estimation, MAbs, 8, 1259-1268 J Leem, J Dunbar, G Georges, J Shi, CM Deane DOI: https://doi. org/10.1080/19420862.2016 1205773, 2016 | 24 | 2016 |
| Structural modeling of antibody variable regions using deep learning—progress and perspectives on drug discovery I Jaszczyszyn, W Bielska, T Gawlowski, P Dudzic, T Satława, J Kończak, ... Frontiers in Molecular Biosciences 10, 1214424, 2023 | 18 | 2023 |
| Ten simple rules for surviving an interdisciplinary PhD S Demharter, N Pearce, K Beattie, I Frost, J Leem, A Martin, ... PLoS Computational Biology 13 (5), e1005512, 2017 | 18 | 2017 |
| TCRBuilder: multi-state T-cell receptor structure prediction WK Wong, C Marks, J Leem, AP Lewis, J Shi, CM Deane Bioinformatics 36 (11), 3580-3581, 2020 | 17 | 2020 |
| Trapped platelets activated in ischemia initiate ventricular fibrillation TS Dhanjal, RA Medina, J Leem, JE Clark, R Southworth, MJ Curtis Circulation: Arrhythmia and Electrophysiology 6 (5), 995-1001, 2013 | 17 | 2013 |
| High-throughput antibody structure modeling and design using abodybuilder J Leem, CM Deane Computational Methods in Protein Evolution, 367-380, 2018 | 9 | 2018 |
| Benchmarking and integrating human B-cell receptor genomic and antibody proteomic profiling K Lê Quý, M Chernigovskaya, M Stensland, S Singh, J Leem, S Revale, ... NPJ systems biology and applications 10 (1), 73, 2024 | 7 | 2024 |
| A generative foundation model for antibody sequence understanding J Barton, A Gaspariunas, DA Yadin, J Dias, FL Nice, DH Minns, ... bioRxiv, 2024.05. 22.594943, 2024 | 7 | 2024 |
Charlotte DeaneProfessor of Structural Bioinformatics, Oxford UniversityVerified email at stats.ox.ac.uk
