| Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species JF Muñoz, L Gade, NA Chow, VN Loparev, P Juieng, EL Berkow, ... Nature communications 9 (1), 5346, 2018 | 512 | 2018 |
| Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses NA Chow, JF Muñoz, L Gade, EL Berkow, X Li, RM Welsh, K Forsberg, ... mBio 11 (2), 1-15, 2020 | 396 | 2020 |
| Genome-wide analysis of experimentally evolved Candida auris reveals multiple novel mechanisms of multidrug resistance H Carolus, S Pierson, JF Muñoz, A Subotić, RB Cruz, CA Cuomo, ... MBio 12 (2), 10.1128/mbio. 03333-20, 2021 | 185 | 2021 |
| Genetic Analysis of Candida auris Implicates Hsp90 in Morphogenesis and Azole Tolerance and Cdr1 in Azole Resistance SH Kim, KR Iyer, L Pardeshi, JF Muñoz, N Robbins, CA Cuomo, KH Wong, ... MBio 10 (1), 10.1128/mbio. 02529-18, 2019 | 182 | 2019 |
| Mutations in TAC1B: a Novel Genetic Determinant of Clinical Fluconazole Resistance in Candida auris JM Rybak, JF Muñoz, KS Barker, JE Parker, BD Esquivel, EL Berkow, ... MBio 11 (3), 10.1128/mbio. 00365-20, 2020 | 178 | 2020 |
| Novel taxa of thermally dimorphic systemic pathogens in the Ajellomycetaceae (Onygenales) K Dukik, JF Muñoz, Y Jiang, P Feng, L Sigler, JB Stielow, J Freeke, ... Mycoses 60 (5), 296-309, 2017 | 163 | 2017 |
| Genome Diversity, Recombination, and Virulence across the Major Lineages of Paracoccidioides JF Muñoz, RA Farrer, CA Desjardins, JE Gallo, S Sykes, S Sakthikumar, ... MSphere 1 (5), 10.1128/msphere. 00213-16, 2016 | 123* | 2016 |
| Best practices on the differential expression analysis of multi-species RNA-seq M Chung, VM Bruno, DA Rasko, CA Cuomo, JF Muñoz, J Livny, AC Shetty, ... Genome biology 22 (1), 121, 2021 | 119 | 2021 |
| In vivo emergence of high-level resistance during treatment reveals the first identified mechanism of amphotericin B resistance in Candida auris JM Rybak, KS Barker, JF Muñoz, JE Parker, S Ahmad, E Mokaddas, ... Clinical Microbiology and Infection 28 (6), 838-843, 2022 | 118 | 2022 |
| Phylogeny, ecology and taxonomy of systemic pathogens and their relatives in Ajellomycetaceae (Onygenales): Blastomyces, Emergomyces, Emmonsia, Emmonsiellopsis Y Jiang, K Dukik, JF Munoz, L Sigler, IS Schwartz, NP Govender, ... Fungal Diversity 90 (1), 245-291, 2018 | 116 | 2018 |
| Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in Candida auris JF Munoz, RM Welsh, T Shea, D Batra, L Gade, D Howard, LA Rowe, ... Genetics 218 (1), iyab029, 2021 | 108 | 2021 |
| Identification of Candida auris by use of the updated Vitek 2 yeast identification system, version 8.01: a multilaboratory evaluation study G Ambaraghassi, PJ Dufresne, SF Dufresne, É Vallières, JF Muñoz, ... Journal of clinical microbiology 57 (11), 10.1128/jcm. 00884-19, 2019 | 108 | 2019 |
| Coordinated host-pathogen transcriptional dynamics revealed using sorted subpopulations and single macrophages infected with Candida albicans JF Muñoz, T Delorey, CB Ford, BY Li, DA Thompson, RP Rao, CA Cuomo Nature communications 10 (1), 1607, 2019 | 92 | 2019 |
| Tracing the evolutionary history and global expansion of Candida auris using population genomic analyses. mBio 11: e03364-19 NA Chow, JF Muñoz, L Gade, EL Berkow, X Li, RM Welsh, K Forsberg, ... | 90 | 2020 |
| 50 Years of Emmonsia Disease in Humans: The Dramatic Emergence of a Cluster of Novel Fungal Pathogens IS Schwartz, C Kenyon, P Feng, NP Govender, K Dukik, L Sigler, Y Jiang, ... PLoS pathogens 11 (11), e1005198, 2015 | 84 | 2015 |
| Experimental evolution identifies adaptive aneuploidy as a mechanism of fluconazole resistance in Candida auris J Bing, T Hu, Q Zheng, JF Muñoz, CA Cuomo, G Huang Antimicrobial agents and chemotherapy 65 (1), 10.1128/aac. 01466-20, 2020 | 83 | 2020 |
| The Dynamic Genome and Transcriptome of the Human Fungal Pathogen Blastomyces and Close Relative Emmonsia JF Muñoz, GM Gauthier, CA Desjardins, JE Gallo, J Holder, TD Sullivan, ... PLoS genetics 11 (10), e1005493, 2015 | 83 | 2015 |
| Emergomyces: The global rise of new dimorphic fungal pathogens IS Schwartz, NP Govender, L Sigler, Y Jiang, TG Maphanga, B Toplis, ... PLoS Pathogens 15 (9), e1007977, 2019 | 82 | 2019 |
| In Vitro Antifungal Resistance of Candida auris Isolates from Bloodstream Infections, South Africa TG Maphanga, SD Naicker, S Kwenda, JF Muñoz, E van Schalkwyk, ... Antimicrobial agents and chemotherapy 65 (9), 10.1128/aac. 00517-21, 2021 | 78 | 2021 |
| Identification and Analysis of the Role of Superoxide Dismutases Isoforms in the Pathogenesis of Paracoccidioides spp. D Tamayo, JF Muñoz, Á Lopez, M Urán, J Herrera, CL Borges, Á Restrepo, ... PLoS Neglected Tropical Diseases 10 (3), e0004481, 2016 | 68 | 2016 |
Christina A. CuomoBrown UniversityVerified email at brown.edu
