| Phylogenomics resolves the timing and pattern of insect evolution B Misof, S Liu, K Meusemann, RS Peters, A Donath, C Mayer, ... Science 346 (6210), 763-767, 2014 | 2971 | 2014 |
| MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization G Meng, Y Li, C Yang, S Liu Nucleic acids research 47 (11), e63-e63, 2019 | 1051 | 2019 |
| Quantification of mesocosm fish and amphibian species diversity via environmental DNA metabarcoding NT Evans, BP Olds, MA Renshaw, CR Turner, Y Li, CL Jerde, AR Mahon, ... Molecular ecology resources 16 (1), 29-41, 2016 | 544 | 2016 |
| Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification X Zhou, Y Li, S Liu, Q Yang, XU Su, L Zhou, M Tang, R Fu, J Li, Q Huang GigaScience 2 (1), 2047-217X-2-4, 2013 | 308 | 2013 |
| Multiplex sequencing of pooled mitochondrial genomes—a crucial step toward biodiversity analysis using mito-metagenomics M Tang, M Tan, G Meng, S Yang, XU Su, S Liu, W Song, Y Li, Q Wu, ... Nucleic acids research 42 (22), e166-e166, 2014 | 299 | 2014 |
| Fish community assessment with eDNA metabarcoding: effects of sampling design and bioinformatic filtering NT Evans, Y Li, MA Renshaw, BP Olds, K Deiner, CR Turner, CL Jerde, ... Canadian Journal of Fisheries and Aquatic Sciences 74 (9), 1362-1374, 2017 | 265 | 2017 |
| Estimating species richness using environmental DNA BP Olds, CL Jerde, MA Renshaw, Y Li, NT Evans, CR Turner, K Deiner, ... Ecology and evolution 6 (12), 4214-4226, 2016 | 262 | 2016 |
| Gene content evolution in the arthropods GWC Thomas, E Dohmen, DST Hughes, SC Murali, M Poelchau, ... Genome biology 21 (1), 15, 2020 | 231 | 2020 |
| Obligate bacterial endosymbionts limit thermal tolerance of insect host species B Zhang, SP Leonard, Y Li, NA Moran Proceedings of the National Academy of Sciences 116 (49), 24712-24718, 2019 | 165 | 2019 |
| Effects of sampling effort on biodiversity patterns estimated from environmental DNA metabarcoding surveys EK Grey, L Bernatchez, P Cassey, K Deiner, M Deveney, KL Howland, ... Scientific Reports 8 (1), 8843, 2018 | 149 | 2018 |
| Long‐range PCR allows sequencing of mitochondrial genomes from environmental DNA K Deiner, MA Renshaw, Y Li, BP Olds, DM Lodge, ME Pfrender Methods in Ecology and Evolution 8 (12), 1888-1898, 2017 | 148 | 2017 |
| Calibrating environmental DNA metabarcoding to conventional surveys for measuring fish species richness ME McElroy, TL Dressler, GC Titcomb, EA Wilson, K Deiner, TL Dudley, ... Frontiers in Ecology and Evolution 8, 276, 2020 | 141 | 2020 |
| Global invasion history of the agricultural pest butterfly Pieris rapae revealed with genomics and citizen science SF Ryan, E Lombaert, A Espeset, R Vila, G Talavera, V Dincă, ... Proceedings of the National Academy of Sciences 116 (40), 20015-20024, 2019 | 117 | 2019 |
| Gene Family Evolution in the Pea Aphid Based on Chromosome-level Genome Assembly Y Li, H Park, TE Smith, NA Moran Molecular biology and evolution, 2019 | 113 | 2019 |
| Optimising the detection of marine taxonomic richness using environmental DNA metabarcoding: the effects of filter material, pore size and extraction method K Deiner, J Lopez, S Bourne, L Holman, M Seymour, EK Grey, ... Metabarcoding and Metagenomics 2 (e28963), 2018 | 105 | 2018 |
| Deep 16S rRNA metagenomics and quantitative PCR analyses of the premature infant fecal microbiota S Arboleya, L Ang, A Margolles, L Yiyuan, Z Dongya, X Liang, G Solís, ... Anaerobe 18 (3), 378-380, 2012 | 98 | 2012 |
| SOAPBarcode: revealing arthropod biodiversity through assembly of Illumina shotgun sequences of PCR amplicons S Liu, Y Li, J Lu, X Su, M Tang, R Zhang, L Zhou, C Zhou, Q Yang, Y Ji, ... Methods in Ecology and Evolution 4 (12), 1142-1150, 2013 | 69 | 2013 |
| Estimating fish alpha-and beta-diversity along a small stream with environmental DNA metabarcoding Y Li, NT Evans, MA Renshaw, CL Jerde, BP Olds, AJ Shogren, K Deiner, ... Metabarcoding and Metagenomics 2, e24262, 2018 | 66 | 2018 |
| Species divergence in gut-restricted bacteria of social bees Y Li, SP Leonard, JE Powell, NA Moran Proceedings of the National Academy of Sciences 119 (18), e2115013119, 2022 | 58 | 2022 |
| The aphid X chromosome is a dangerous place for functionally important genes: diverse evolution of hemipteran genomes based on chromosome-level assemblies Y Li, B Zhang, NA Moran Molecular biology and evolution 37 (8), 2357-2368, 2020 | 56 | 2020 |
Michael PfrenderProfessor, University of Notre DameVerified email at nd.edu
