| Bayesian coalescent inference of past population dynamics from molecular sequences AJ Drummond, A Rambaut, B Shapiro, OG Pybus Molecular biology and evolution 22 (5), 1185-1192, 2005 | 3613 | 2005 |
| Towards complete and error-free genome assemblies of all vertebrate species A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ... Nature 592 (7856), 737-746, 2021 | 2952 | 2021 |
| Whole-genome analyses resolve early branches in the tree of life of modern birds ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ... Science 346 (6215), 1320-1331, 2014 | 2164 | 2014 |
| Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse L Orlando, A Ginolhac, G Zhang, D Froese, A Albrechtsen, M Stiller, ... Nature 499 (7456), 74-78, 2013 | 1089 | 2013 |
| Diverse plant and animal genetic records from Holocene and Pleistocene sediments E Willerslev, AJ Hansen, J Binladen, TB Brand, MTP Gilbert, B Shapiro, ... Science 300 (5620), 791-795, 2003 | 917 | 2003 |
| Species-specific responses of Late Quaternary megafauna to climate and humans ED Lorenzen, D Nogués-Bravo, L Orlando, J Weinstock, J Binladen, ... Nature 479 (7373), 359-364, 2011 | 853 | 2011 |
| Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences B Shapiro, A Rambaut, AJ Drummond Molecular biology and evolution 23 (1), 7-9, 2006 | 839 | 2006 |
| Rise and fall of the Beringian steppe bison B Shapiro, AJ Drummond, A Rambaut, MC Wilson, PE Matheus, AV Sher, ... Science 306 (5701), 1561-1565, 2004 | 823 | 2004 |
| Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA HN Poinar, C Schwarz, J Qi, B Shapiro, RDE MacPhee, B Buigues, ... science 311 (5759), 392-394, 2006 | 806 | 2006 |
| Complete mitochondrial genomes of ancient canids suggest a European origin of domestic dogs O Thalmann, B Shapiro, P Cui, VJ Schuenemann, SK Sawyer, ... Science 342 (6160), 871-874, 2013 | 802 | 2013 |
| Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci MS Gill, P Lemey, NR Faria, A Rambaut, B Shapiro, MA Suchard Molecular biology and evolution 30 (3), 713-724, 2013 | 614 | 2013 |
| Skyline‐plot methods for estimating demographic history from nucleotide sequences SYW Ho, B Shapiro Molecular ecology resources 11 (3), 423-434, 2011 | 561 | 2011 |
| The origins and spread of domestic horses from the Western Eurasian steppes P Librado, N Khan, A Fages, MA Kusliy, T Suchan, L Tonasso-Calvière, ... Nature 598 (7882), 634-640, 2021 | 455 | 2021 |
| Dense sampling of bird diversity increases power of comparative genomics S Feng, J Stiller, Y Deng, J Armstrong, QI Fang, AH Reeve, D Xie, G Chen, ... Nature 587 (7833), 252-257, 2020 | 453 | 2020 |
| Dynamics of Pleistocene population extinctions in Beringian brown bears I Barnes, P Matheus, B Shapiro, D Jensen, A Cooper Science 295 (5563), 2267-2270, 2002 | 448 | 2002 |
| Conservation of biodiversity in the genomics era MA Supple, B Shapiro Genome biology 19 (1), 131, 2018 | 426 | 2018 |
| The earliest evidence for anatomically modern humans in northwestern Europe T Higham, T Compton, C Stringer, R Jacobi, B Shapiro, E Trinkaus, ... Nature 479 (7374), 521-524, 2011 | 411 | 2011 |
| Prehistoric genomes reveal the genetic foundation and cost of horse domestication M Schubert, H Jónsson, D Chang, C Der Sarkissian, L Ermini, A Ginolhac, ... Proceedings of the National Academy of Sciences 111 (52), E5661-E5669, 2014 | 398 | 2014 |
| Million-year-old DNA sheds light on the genomic history of mammoths T Van Der Valk, P Pečnerová, D Díez-del-Molino, A Bergström, ... Nature 591 (7849), 265-269, 2021 | 397 | 2021 |
| A comparative genomics multitool for scientific discovery and conservation Nature 587 (7833), 240-245, 2020 | 388 | 2020 |
Richard E. GreenProf of Biomolecular Engineering, UCSC, UC Santa Cruz Genomics InstituteVerified email at soe.ucsc.edu
