| Weak SINDy for partial differential equations DA Messenger, DM Bortz Journal of Computational Physics 443, 110525, 2021 | 312 | 2021 |
| Weak SINDy: Galerkin-based data-driven model selection DA Messenger, DM Bortz Multiscale Modeling & Simulation 19 (3), 1474-1497, 2021 | 212 | 2021 |
| Estimating kinetic parameters from HIV primary infection data through the eyes of three different mathematical models MS Ciupe, BL Bivort, DM Bortz, PW Nelson Mathematical biosciences 200 (1), 1-27, 2006 | 207* | 2006 |
| Sensitivity analysis of a nonlinear lumped parameter model of HIV infection dynamics DM Bortz, PW Nelson Bulletin of mathematical biology 66 (5), 1009-1026, 2004 | 125 | 2004 |
| Incorporation of variability into the modeling of viral delays in HIV infection dynamics HT Banks, DM Bortz, SE Holte Mathematical biosciences 183 (1), 63-91, 2003 | 115 | 2003 |
| The simplex gradient and noisy optimization problems DM Bortz, CT Kelley Computational Methods for Optimal Design and Control: Proceedings of the …, 1998 | 106 | 1998 |
| A parameter sensitivity methodology in the context of HIV delay equation models HT Banks, DM Bortz Journal of mathematical biology 50 (6), 607-625, 2005 | 90 | 2005 |
| Model selection and mixed-effects modeling of HIV infection dynamics DM Bortz, PW Nelson Bulletin of mathematical biology 68 (8), 2005-2025, 2006 | 79 | 2006 |
| COPS: Large-scale nonlinearly constrained optimization problems (Technical Report ANL/MCS-TM-237) AS Bondarenko, DM Bortz, JJ Moré Argonne: Argonne National Laboratory, 1998 | 73* | 1998 |
| Modeling keratinocyte wound healing dynamics: cell–cell adhesion promotes sustained collective migration JT Nardini, DA Chapnick, X Liu, DM Bortz Journal of theoretical biology 400, 103-117, 2016 | 70 | 2016 |
| Life cycle of a cyanobacterial carboxysome NC Hill, JW Tay, S Altus, DM Bortz, JC Cameron Science Advances 6 (19), eaba1269, 2020 | 68 | 2020 |
| Modeling and Imaging Techniques with Potential for Application in Bioterrorism HT Banks, DM Bortz, G Pinter, L Potter Bioterrorism: Mathematical Modeling Applications in Homeland Security 28, 129, 2003 | 62 | 2003 |
| Contribution of the Klebsiella pneumoniae Capsule to Bacterial Aggregate and Biofilm Microstructures SP Dzul, MM Thornton, DN Hohne, EJ Stewart, AA Shah, DM Bortz, ... Applied and environmental microbiology 77 (5), 1777-1782, 2011 | 59 | 2011 |
| Mechanical regulation of photosynthesis in cyanobacteria KA Moore, S Altus, JW Tay, JB Meehl, EB Johnson, DM Bortz, ... Nature microbiology 5 (5), 757-767, 2020 | 58 | 2020 |
| Learning mean-field equations from particle data using WSINDy DA Messenger, DM Bortz Physica D: Nonlinear Phenomena 439, 133406, 2022 | 57 | 2022 |
| Physics of biofilms: the initial stages of biofilm formation and dynamics G Lambert, A Bergman, Q Zhang, DM Bortz, R Austin New Journal of Physics 16 (4), 045005, 2014 | 41 | 2014 |
| Dynamics of intrapulmonary bacterial growth in a murine model of repeated microaspiration I Ben-David, SE Price, DM Bortz, CF Greineder, SE Cohen, AL Bauer, ... American journal of respiratory cell and molecular biology 33 (5), 476-482, 2005 | 41 | 2005 |
| Direct estimation of parameters in ODE models using WENDy: Weak-form estimation of nonlinear dynamics DM Bortz, DA Messenger, V Dukic Bulletin of Mathematical Biology 85 (11), 110, 2023 | 40 | 2023 |
| Klebsiella pneumoniae Flocculation Dynamics DM Bortz, TL Jackson, KA Taylor, AP Thompson, JG Younger Bulletin of Mathematical Biology 70 (3), 745-768, 2008 | 40 | 2008 |
| Weak-form latent space dynamics identification A Tran, X He, DA Messenger, Y Choi, DM Bortz Computer Methods in Applied Mechanics and Engineering 427, 116998, 2024 | 36 | 2024 |
Daniel Ames MessengerDirector's Postdoctoral Fellow, Theoretical Division, Los Alamos National LabsVerified email at colorado.edu
