| Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA BJ Kelly, R Gross, K Bittinger, S Sherrill-Mix, JD Lewis, RG Collman, ... Bioinformatics 31 (15), 2461-2468, 2015 | 470 | 2015 |
| The fatty acid biosynthesis enzyme FabI plays a key role in the development of liver-stage malarial parasites M Yu, TRS Kumar, LJ Nkrumah, A Coppi, S Retzlaff, CD Li, BJ Kelly, ... Cell host & microbe 4 (6), 567-578, 2008 | 361 | 2008 |
| Composition and dynamics of the respiratory tract microbiome in intubated patients BJ Kelly, I Imai, K Bittinger, A Laughlin, BD Fuchs, FD Bushman, ... Microbiome 4 (1), 7, 2016 | 209 | 2016 |
| Enterococci enhance Clostridioides difficile pathogenesis AB Smith, ML Jenior, O Keenan, JL Hart, J Specker, A Abbas, PC Rangel, ... Nature 611 (7937), 780-786, 2022 | 187 | 2022 |
| Newer glycopeptide antibiotics for treatment of complicated skin and soft tissue infections: systematic review, network meta-analysis and cost analysis R Agarwal, SM Bartsch, BJ Kelly, M Prewitt, Y Liu, Y Chen, CA Umscheid Clinical Microbiology and Infection 24 (4), 361-368, 2018 | 85 | 2018 |
| Clinical practice and infrastructure review of fecal microbiota transplantation for Clostridium difficile infection BJ Kelly, P Tebas Chest 153 (1), 266-277, 2018 | 78 | 2018 |
| Robust airway microbiome signatures in acute respiratory failure and hospital-acquired pneumonia E Montassier, GD Kitsios, JE Radder, Q Le Bastard, BJ Kelly, A Panzer, ... Nature Medicine 29 (11), 2793-2804, 2023 | 63 | 2023 |
| Multiple introductions of SARS-CoV-2 Alpha and Delta variants into white-tailed deer in Pennsylvania AD Marques, S Sherrill-Mix, JK Everett, H Adhikari, S Reddy, JC Ellis, ... MBio 13 (5), e02101-22, 2022 | 56 | 2022 |
| Molecular analysis of bacterial contamination on stethoscopes in an intensive care unit VR Knecht, JE McGinniss, HM Shankar, EL Clarke, BJ Kelly, I Imai, ... Infection Control & Hospital Epidemiology 40 (2), 171-177, 2019 | 47 | 2019 |
| Impact of levofloxacin for the prophylaxis of bloodstream infection on the gut microbiome in patients with hematologic malignancy M Ziegler, JH Han, D Landsburg, D Pegues, E Reesey, C Gilmar, ... Open forum infectious diseases 6 (7), ofz252, 2019 | 41 | 2019 |
| Combined Biomarkers Predict Acute Mortality Among Critically Ill Patients With Suspected Sepsis BJ Kelly, E Lautenbach, I Nachamkin, SE Coffin, JS Gerber, BD Fuchs, ... Critical care medicine 46 (7), 1106-1113, 2018 | 41 | 2018 |
| Quantitation of HIV DNA integration: Effects of differential integration site distributions on Alu-PCR assays T Brady, BJ Kelly, F Male, S Roth, A Bailey, N Malani, R Gijsbers, ... Journal of virological methods 189 (1), 53-57, 2013 | 40 | 2013 |
| Combined biomarkers discriminate a low likelihood of bacterial infection among surgical intensive care unit patients with suspected sepsis BJ Kelly, E Lautenbach, I Nachamkin, SE Coffin, JS Gerber, BD Fuchs, ... Diagnostic microbiology and infectious disease 85 (1), 109-115, 2016 | 35 | 2016 |
| SARS-CoV-2 evolution during prolonged infection in immunocompromised patients AD Marques, J Graham-Wooten, AS Fitzgerald, A Sobel Leonard, ... Mbio 15 (3), e00110-24, 2024 | 31 | 2024 |
| Dynamic changes in the nasal microbiome associated with disease activity in patients with granulomatosis with polyangiitis RL Rhee, J Lu, K Bittinger, JJ Lee, LM Mattei, AG Sreih, S Chou, JJ Miner, ... Arthritis & Rheumatology 73 (9), 1703-1712, 2021 | 30 | 2021 |
| Comparison of SARS-CoV-2 variants of concern in primary human nasal cultures demonstrates Delta as most cytopathic and Omicron as fastest replicating NS Tanneti, AK Patel, LH Tan, AD Marques, RAPM Perera, S Sherrill-Mix, ... Mbio 15 (4), e03129-23, 2024 | 28 | 2024 |
| Stopping Hospital Infections with Environmental Services (SHINE): A Cluster-randomized Trial of Intensive Monitoring Methods for Terminal Room Cleaning on Rates of Multidrug … MJ Ziegler, HH Babcock, SF Welbel, DK Warren, WE Trick, P Tolomeo, ... Clinical Infectious Diseases 75 (7), 1217-1223, 2022 | 28 | 2022 |
| SARS-CoV-2 Delta variant (AY. 3) in the feces of a domestic cat OC Lenz, AD Marques, BJ Kelly, KG Rodino, SD Cole, RAPM Perera, ... Viruses 14 (2), 421, 2022 | 28 | 2022 |
| Quantifying the Impact of Nasopharyngeal Specimen Quality on Severe Acute Respiratory Syndrome Coronavirus 2 Test Performance M Richard-Greenblatt, MJ Ziegler, V Bromberg, E Huang, H Abdallah, ... Open forum infectious diseases 8 (6), ofab235, 2021 | 21 | 2021 |
| Gut microbiota features associated with Clostridioides difficile colonization in puppies ASF Berry, BJ Kelly, D Barnhart, DJ Kelly, DP Beiting, RN Baldassano, ... Plos one 14 (8), e0215497, 2019 | 20 | 2019 |
