| BioCreAtIvE task 1A: gene mention finding evaluation A Yeh, A Morgan, M Colosimo, L Hirschman BMC bioinformatics 6 (Suppl 1), S2, 2005 | 291 | 2005 |
| Overview of BioCreAtIvE task 1B: normalized gene lists L Hirschman, M Colosimo, A Morgan, A Yeh BMC bioinformatics 6 (Suppl 1), S11, 2005 | 223 | 2005 |
| Identification of thermosensory and olfactory neuron-specific genes via expression profiling of single neuron types ME Colosimo, A Brown, S Mukhopadhyay, C Gabel, AE Lanjuin, ... Current biology 14 (24), 2245-2251, 2004 | 169 | 2004 |
| Gene name identification and normalization using a model organism database AA Morgan, L Hirschman, M Colosimo, AS Yeh, JB Colombe Journal of Biomedical Informatics 37 (6), 396-410, 2004 | 119 | 2004 |
| The UNC-3 Olf/EBF protein represses alternate neuronal programs to specify chemosensory neuron identity K Kim, ME Colosimo, H Yeung, P Sengupta Developmental biology 286 (1), 136-148, 2005 | 53 | 2005 |
| Data preparation and interannotator agreement: BioCreAtIvE task 1B M Colosimo, A Morgan, A Yeh, J Colombe, L Hirschman BMC bioinformatics 6 (Suppl 1), S12, 2005 | 52 | 2005 |
| Gene name extraction using FlyBase resources A Morgan, L Hirschman, A Yeh, M Colosimo Proceedings of the ACL 2003 workshop on Natural language processing in …, 2003 | 52 | 2003 |
| The divergent orphan nuclear receptor ODR-7 regulates olfactory neuron gene expression via multiple mechanisms in Caenorhabditis elegans ME Colosimo, S Tran, P Sengupta Genetics 165 (4), 1779-1791, 2003 | 37 | 2003 |
| Controlled vocabularies for microbial virulence factors T Korves, ME Colosimo Trends in microbiology 17 (7), 279-285, 2009 | 26 | 2009 |
| Nephele: genotyping via complete composition vectors and MapReduce. ME Colosimo, MW Peterson, SA Mardis, L Hirschman Source code for biology and medicine 6, 13, 2011 | 24 | 2011 |
| Evaluating the automatic mapping of human gene and protein mentions to unique identifiers AA Morgan, B Wellner, JB Colombe, R Arens, ME Colosimo, L Hirschman Pac Symp Biocomput 12, 281–91, 2007 | 18 | 2007 |
| EVALUATING THE AUTOMATIC MAPPING OF HUMAN GENE AND PROTEIN MENTIONS TO UNIQUE IDENTIFIERS AM ALEXANDER, B WELLNER, BC JEFFREY, R ARENS, ... | 18 | |
| TreeViewJ: An application for viewing and analyzing phylogenetic trees MW Peterson, ME Colosimo Source Code for Biology and Medicine 2 (1), 1-4, 2007 | 16 | 2007 |
| DISCOVERY NOTE C Blaschke, A Yeh, E Camon, M Colosimo, R Apweiler, L Hirschman, ... Bioinformatics 21 (23), 4199-4200, 2005 | 6* | 2005 |
| Do you do text? C Blaschke, A Yeh, E Camon, M Colosimo, R Apweiler, L Hirschman, ... Bioinformatics 21 (23), 4199-4200, 2005 | 6 | 2005 |
| Task 1B: Gene list task BioCreAtIve workshop L Hirschman, M Colosimo, A Morgan, J Columbe, A Yeh BioCreative: Critical Assessment for Information Extraction in Biology, 2004 | 6 | 2004 |
| State of the Art Biometrics Excellence Roadmap M Colosimo, R Graef, S Lampert, M Peterson DNA, 2009 | 2 | 2009 |
| Ontology Support for Influenza Research and Surveillance J Luciano, L Hirschman, M Colosimo | 1 | |
| Genomics for Bioforensics M Colosimo, L Hirschman | | 2008 |
| EVALUATING THE AUTOMATIC MAPPING OF HUMAN GENE AND PROTEIN MENTIONS TO UNIQUE IDENTIFIERS R ARENS, ME COLOSIMO, L HIRSCHMAN Pacific Symposium on Biocomputing 2007: Maui, Hawaii, 3-7 January 2007, 281, 2006 | | 2006 |
