| Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression AM Khalil, M Guttman, M Huarte, M Garber, A Raj, D Rivea Morales, ... Proceedings of the National Academy of Sciences 106 (28), 11667-11672, 2009 | 3464 | 2009 |
| Nature, nurture, or chance: stochastic gene expression and its consequences A Raj, A Van Oudenaarden Cell 135 (2), 216-226, 2008 | 3244 | 2008 |
| Imaging individual mRNA molecules using multiple singly labeled probes A Raj, P Van Den Bogaard, SA Rifkin, A Van Oudenaarden, S Tyagi Nature methods 5 (10), 877, 2008 | 2458 | 2008 |
| Stochastic mRNA synthesis in mammalian cells A Raj, CS Peskin, D Tranchina, DY Vargas, S Tyagi PLoS biology 4 (10), e309, 2006 | 2132 | 2006 |
| Rare cell variability and drug-induced reprogramming as a mode of cancer drug resistance SM Shaffer, MC Dunagin, SR Torborg, EA Torre, B Emert, C Krepler, ... Nature 546 (7658), 431-435, 2017 | 1382 | 2017 |
| Control of somatic tissue differentiation by the long non-coding RNA TINCR M Kretz, Z Siprashvili, C Chu, DE Webster, A Zehnder, K Qu, CS Lee, ... Nature 493 (7431), 231-235, 2013 | 1104 | 2013 |
| Noise in gene expression determines cell fate in Bacillus subtilis H Maamar, A Raj, D Dubnau Science 317 (5837), 526, 2007 | 843 | 2007 |
| SAVER: gene expression recovery for single-cell RNA sequencing M Huang, J Wang, E Torre, H Dueck, S Shaffer, R Bonasio, JI Murray, ... Nature methods 15 (7), 539-542, 2018 | 842 | 2018 |
| Localization and abundance analysis of human lncRNAs at single-cell and single-molecule resolution MN Cabili, MC Dunagin, PD McClanahan, A Biaesch, O Padovan-Merhar, ... Genome biology 16 (1), 20, 2015 | 829 | 2015 |
| Variability in gene expression underlies incomplete penetrance A Raj, SA Rifkin, E Andersen, A Van Oudenaarden Nature 463 (7283), 913-918, 2010 | 821 | 2010 |
| Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre E Hacisuleyman, LA Goff, C Trapnell, A Williams, J Henao-Mejia, L Sun, ... Nature structural & molecular biology 21 (2), 198-206, 2014 | 758 | 2014 |
| Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms O Padovan-Merhar, GP Nair, AG Biaesch, A Mayer, S Scarfone, SW Foley, ... Molecular cell 58 (2), 339-352, 2015 | 548 | 2015 |
| LincRNA-p21 activates p21 in cis to promote Polycomb target gene expression and to enforce the G1/S checkpoint N Dimitrova, JR Zamudio, RM Jong, D Soukup, R Resnick, K Sarma, ... Molecular cell 54 (5), 777-790, 2014 | 529 | 2014 |
| Nanoscale imaging of RNA with expansion microscopy F Chen, AT Wassie, AJ Cote, A Sinha, S Alon, S Asano, ER Daugharthy, ... Nature methods 13 (8), 679-684, 2016 | 486 | 2016 |
| Remodeling of the collagen matrix in aging skin promotes melanoma metastasis and affects immune cell motility A Kaur, BL Ecker, SM Douglass, CH Kugel III, MR Webster, FV Almeida, ... Cancer discovery 9 (1), 64-81, 2019 | 438 | 2019 |
| Enhancer regulation of transcriptional bursting parameters revealed by forced chromatin looping CR Bartman, SC Hsu, CCS Hsiung, A Raj, GA Blobel Molecular cell 62 (2), 237-247, 2016 | 415 | 2016 |
| Single-molecule approaches to stochastic gene expression A Raj, A van Oudenaarden Annual review of biophysics 38 (1), 255-270, 2009 | 412 | 2009 |
| The long non-coding RNA Morrbid regulates Bim and short-lived myeloid cell lifespan JJ Kotzin, SP Spencer, SJ McCright, DBU Kumar, MA Collet, WK Mowel, ... Nature 537 (7619), 239-243, 2016 | 319 | 2016 |
| Mechanism of mRNA transport in the nucleus DY Vargas, A Raj, SAE Marras, FR Kramer, S Tyagi Proceedings of the National Academy of Sciences 102 (47), 17008-17013, 2005 | 316 | 2005 |
| Mitotic transcription and waves of gene reactivation during mitotic exit KC Palozola, G Donahue, H Liu, GR Grant, JS Becker, A Cote, H Yu, ... Science 358 (6359), 119-122, 2017 | 303 | 2017 |
Margaret DunaginDepartment of Bioengineering, University of PennsylvaniaVerified email at seas.upenn.edu
