| Sambamba: fast processing of NGS alignment formats A Tarasov, AJ Vilella, E Cuppen, IJ Nijman, P Prins Bioinformatics 31 (12), 2032-2034, 2015 | 2360 | 2015 |
| A draft human pangenome reference WW Liao, M Asri, J Ebler, D Doerr, M Haukness, G Hickey, S Lu, JK Lucas, ... Nature 617 (7960), 312-324, 2023 | 1091 | 2023 |
| Tissue-specific mutation accumulation in human adult stem cells during life F Blokzijl, J De Ligt, M Jager, V Sasselli, S Roerink, N Sasaki, M Huch, ... Nature 538 (7624), 260-264, 2016 | 1071 | 2016 |
| R/qtl: high-throughput multiple QTL mapping D Arends, P Prins, RC Jansen, KW Broman Bioinformatics 26 (23), 2990-2992, 2010 | 502 | 2010 |
| R/qtl2: software for mapping quantitative trait loci with high-dimensional data and multiparent populations KW Broman, DM Gatti, P Simecek, NA Furlotte, P Prins, Ś Sen, BS Yandell, ... Genetics 211 (2), 495-502, 2019 | 462 | 2019 |
| Mapping Determinants of Gene Expression Plasticity by Genetical Genomics in C. elegans Y Li, OA Alvarez, EW Gutteling, M Tijsterman, J Fu, JAG Riksen, ... PLoS genetics 2 (12), e222, 2006 | 350 | 2006 |
| BioRuby: bioinformatics software for the Ruby programming language N Goto, P Prins, M Nakao, R Bonnal, J Aerts, T Katayama Bioinformatics 26 (20), 2617-2619, 2010 | 222 | 2010 |
| Big data, but are we ready? O Trelles, P Prins, M Snir, RC Jansen Nature Reviews Genetics 12 (3), 224-224, 2011 | 216 | 2011 |
| A spectrum of free software tools for processing the VCF variant call format: vcflib, bio-vcf, cyvcf2, hts-nim and slivar E Garrison, ZN Kronenberg, ET Dawson, BS Pedersen, P Prins PLoS computational biology 18 (5), e1009123, 2022 | 208 | 2022 |
| Building pangenome graphs E Garrison, A Guarracino, S Heumos, F Villani, Z Bao, L Tattini, ... Nature Methods 21 (11), 2008-2012, 2024 | 207 | 2024 |
| GeneNetwork: a toolbox for systems genetics MK Mulligan, K Mozhui, P Prins, RW Williams Systems genetics: Methods and protocols, 75-120, 2016 | 206 | 2016 |
| ODGI: understanding pangenome graphs A Guarracino, S Heumos, S Nahnsen, P Prins, E Garrison Bioinformatics 38 (13), 3319-3326, 2022 | 166 | 2022 |
| A platform for experimental precision medicine: The extended BXD mouse family DG Ashbrook, D Arends, P Prins, MK Mulligan, S Roy, EG Williams, ... Cell systems 12 (3), 235-247. e9, 2021 | 160 | 2021 |
| A Secreted SPRY Domain-Containing Protein (SPRYSEC) from the Plant-Parasitic Nematode Globodera rostochiensis Interacts with a CC-NB-LRR Protein from a … S Rehman, W Postma, T Tytgat, P Prins, L Qin, H Overmars, J Vossen, ... Molecular plant-microbe interactions 22 (3), 330-340, 2009 | 142 | 2009 |
| A genome-wide genetic map of NB-LRR disease resistance loci in potato E Bakker, T Borm, P Prins, E van der Vossen, G Uenk, M Arens, J de Boer, ... Theoretical and Applied Genetics 123 (3), 493-508, 2011 | 92 | 2011 |
| Vcflib and tools for processing the VCF variant call format E Garrison, ZN Kronenberg, ET Dawson, BS Pedersen, P Prins BioRxiv, 2021.05. 21.445151, 2021 | 82 | 2021 |
| GenEST, a powerful bidirectional link between cDNA sequence data and gene expression profiles generated by cDNA-AFLP L Qin, P Prins, JT Jones, H Popeijus, G Smant, J Bakker, J Helder Nucleic Acids Research 29 (7), 1616-1622, 2001 | 71 | 2001 |
| BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains T Katayama, MD Wilkinson, KF Aoki-Kinoshita, S Kawashima, ... Journal of biomedical semantics 5 (1), 5, 2014 | 69 | 2014 |
| Identification of imprinted genes subject to parent-of-origin specific expression in Arabidopsis thalianaseeds PC McKeown, S Laouielle-Duprat, P Prins, P Wolff, MW Schmid, ... BMC plant biology 11 (1), 113, 2011 | 65 | 2011 |
| An integrated systems genetics and omics toolkit to probe gene function H Li, X Wang, D Rukina, Q Huang, T Lin, V Sorrentino, H Zhang, ... Cell systems 6 (1), 90-102. e4, 2018 | 64 | 2018 |
Robert W WilliamsProfessor of Genetics, Genomics and Informatics, UTHSCVerified email at uthsc.edu
