| Machine learning predictions of MHC-II specificities reveal alternative binding mode of class II epitopes J Racle, P Guillaume, J Schmidt, J Michaux, A Larabi, K Lau, MAS Perez, ... Immunity 56 (6), 1359-1375. e13, 2023 | 106 | 2023 |
| Improved predictions of antigen presentation and TCR recognition with MixMHCpred2. 2 and PRIME2. 0 reveal potent SARS-CoV-2 CD8+ T-cell epitopes D Gfeller, J Schmidt, G Croce, P Guillaume, S Bobisse, R Genolet, ... Cell Systems 14 (1), 72-83. e5, 2023 | 101 | 2023 |
| Epistatic models predict mutable sites in SARS-CoV-2 proteins and epitopes J Rodriguez-Rivas, G Croce, M Muscat, M Weigt Proceedings of the National Academy of Sciences 119 (4), e2113118119, 2022 | 97 | 2022 |
| Deep learning predictions of TCR-epitope interactions reveal epitope-specific chains in dual alpha T cells G Croce, S Bobisse, DL Moreno, J Schmidt, P Guillame, A Harari, ... Nature Communications 15 (1), 3211, 2024 | 74 | 2024 |
| Lessons learned from the IMMREP23 TCR-epitope prediction challenge M Nielsen, A Eugster, MF Jensen, M Goel, A Tiffeau-Mayer, A Pelissier, ... ImmunoInformatics 16, 100045, 2024 | 38 | 2024 |
| Both APRIL and antibody-fragment-based CAR T cells for myeloma induce BCMA downmodulation by trogocytosis and internalization N Camviel, B Wolf, G Croce, D Gfeller, V Zoete, C Arber Journal for Immunotherapy of Cancer 10 (11), e005091, 2022 | 37 | 2022 |
| A multi-scale coevolutionary approach to predict interactions between protein domains G Croce, T Gueudré, MV Ruiz Cuevas, V Keidel, M Figliuzzi, H Szurmant, ... PLoS computational biology 15 (10), e1006891, 2019 | 29 | 2019 |
| Deciphering polymorphism in 61,157 Escherichia coli genomes via epistatic sequence landscapes L Vigué, G Croce, M Petitjean, E Ruppé, O Tenaillon, M Weigt Nature Communications 13 (1), 4030, 2022 | 16 | 2022 |
| FilterDCA: Interpretable supervised contact prediction using inter-domain coevolution M Muscat, G Croce, E Sarti, M Weigt PLoS computational biology 16 (10), e1007621, 2020 | 13 | 2020 |
| Predictions of immunogenicity reveal potent SARS-CoV-2 CD8+ T-cell epitopes D Gfeller, J Schmidt, G Croce, P Guillaume, S Bobisse, R Genolet, ... bioRxiv, 2022.05. 23.492800, 2022 | 12 | 2022 |
| Phage display enables machine learning discovery of cancer antigen–specific TCRs G Croce, R Lani, D Tardivon, S Bobisse, M de Tiani, M Bragina, ... Science advances 11 (24), eads5589, 2025 | 8 | 2025 |
| Improved predictions of antigen presentation and TCR recognition with MixMHCpred2. 2 and PRIME2. 0 reveal potent SARS-CoV-2 CD8+ T-cell epitopes. Cell Systems (2023) D Gfeller, J Schmidt, G Croce, P Guillaume, S Bobisse, R Genolet, ... | 8 | |
| Deep learning predictions of tcr-epitope interactions reveal epitope-specific chains in dual alpha T cells. Nat. Commun. 15, 3211 G Croce, S Bobisse, DL Moreno, J Schmidt, P Guillame, A Harari, ... | 5 | 2024 |
| Improved predictions of antigen presentation and TCR recognition with MixMHCpred2. 2 and PRIME2. 0 reveal potent SARS-CoV-2 CD8þ T-cell epitopes. Cell Syst. 14, 72–83. e5 D Gfeller, J Schmidt, G Croce, P Guillaume, S Bobisse, R Genolet, ... | 5 | 2023 |
| Adaptive cluster expansion for Ising spin models S Cocco, G Croce, F Zamponi The European Physical Journal B 92 (11), 259, 2019 | 4 | 2019 |
| Towards a genome-scale coevolutionary analysis G Croce Sorbonne Université, 2019 | 2 | 2019 |
| Key determinants of T cell epitope recognition revealed by TCR specificity profiles Y Liu, G Croce, D Tadros, D Moreno, A Michel, AC Thierry, R Genolet, ... bioRxiv, 2025.11. 17.688817, 2025 | 1 | 2025 |
| Statistical modelling of CDR3 sequences provides robust quality control for TCR repertoire datasets DL Moreno, G Croce, D Gfeller bioRxiv, 2025.12. 11.693618, 2025 | | 2025 |
| Rapid BCMA downmodulation on myeloma cells upon CAR T cell contact is mediated by trogocytosis and BCMA internalization N Camviel, B Wolf, G Croce, D Gfeller, V Zoete, C Arber bioRxiv, 2022.07. 23.501252, 2022 | | 2022 |
| MECHANISMS OF RESISTANCE TO CHIMERIC ANTIGEN RECEPTOR T CELL THERAPY IN MULTIPLE MYELOMA N Camviel, B Wolf, G Croce, D Gfeller, V Zoete, C Arber HUMAN GENE THERAPY 33 (7-8), A12-A13, 2022 | | 2022 |
david gfellerUniversity of LausanneVerified email at unil.ch
